Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 3e-18
seq216 100 9e-18
seq7 98.7 3e-17
>seq4
Length=3843180
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 3531776 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 3531717
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 3531716 TCCCGGGTTTCGGC 3531703
>seq216
Length=424711
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 163450 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 163509
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 163510 ATCCCGGGTTTCGGC 163524
>seq7
Length=2161886
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 1376094 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 1376153
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1376154 CCGGGTTTCGGC 1376165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848908660260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |