Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 9e-11 >seq12 Length=2314596 Score = 86.0 bits (94), Expect = 9e-11 Identities = 328/503 (65%), Gaps = 9/503 (2%) Strand=Plus/Plus Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||||||| |||| | ||| | || || ||||| ||||| | || || || ||||| Sbjct 281243 ATTTGGGAAAAGTACAAGGAAG-CTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGACCT 281301 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 ||| | |||||||| | || | || || | |||||||| || Sbjct 281302 TTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCACA 281361 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 || || ||||||||| || || ||||| || || || ||||| | | | | Sbjct 281362 TGTACTTGCCTTTTTT-GCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAGAT 281420 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | | |||| || ||| | | ||||| |||| ||||| || ||||| || ||||| | Sbjct 281421 TCAGTCAAGAAGTACAAGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCATTG 281480 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTC-CTGATCGACACCTACGTCAAGGACCCGGTC 1456074 |||| ||||| || |||| || | | | || || ||||| || | ||||| | Sbjct 281481 AAAATATCCATTCAGAAATGTA-TAGTACTCTCATTGACACTTATATATTTGACCCAGAA 281539 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 ||||| || || || || || || || |||| | || | ||| ||||| || Sbjct 281540 GAGAAAGAATTTCTTTTCAATGCTATTGAAACCATGCCTTGTGTTAAGAAGAAGGCTGAT 281599 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 ||||| | | ||||||| || | | | | ||| || | || || | || | | Sbjct 281600 TGGGCTCTTCATTGGATCAGCA-GTAAGAATGCAACA-TTCCCAGAACGAGTTGTTGCAT 281657 Query 1456195 TTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAG 1456252 |||| || || || || || || || || || ||||| ||| || ||||||||||||||| Sbjct 281658 TTGCAGCTGTGGAAGGAATTTTCTTTTCAGGAAGTTT-TGCTGCTATCTTTTGGCTCAAG 281716 Query 1456253 AAGCGCGGCCTCATGCCCGGTCT 1456275 || || || || ||||| || || Sbjct 281717 AAACGGGGTCTTATGCCAGGACT 281739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177426550070056