Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq12 86.0 9e-11
>seq12
Length=2314596
Score = 86.0 bits (94), Expect = 9e-11
Identities = 328/503 (65%), Gaps = 9/503 (2%)
Strand=Plus/Plus
Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835
|| ||||||| |||| | ||| | || || ||||| ||||| | || || || |||||
Sbjct 281243 ATTTGGGAAAAGTACAAGGAAG-CTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGACCT 281301
Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895
||| | |||||||| | || | || || | |||||||| ||
Sbjct 281302 TTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCACA 281361
Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955
|| || ||||||||| || || ||||| || || || ||||| | | | |
Sbjct 281362 TGTACTTGCCTTTTTT-GCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAGAT 281420
Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015
| | |||| || ||| | | ||||| |||| ||||| || ||||| || ||||| |
Sbjct 281421 TCAGTCAAGAAGTACAAGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCATTG 281480
Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTC-CTGATCGACACCTACGTCAAGGACCCGGTC 1456074
|||| ||||| || |||| || | | | || || ||||| || | ||||| |
Sbjct 281481 AAAATATCCATTCAGAAATGTA-TAGTACTCTCATTGACACTTATATATTTGACCCAGAA 281539
Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134
||||| || || || || || || || |||| | || | ||| ||||| ||
Sbjct 281540 GAGAAAGAATTTCTTTTCAATGCTATTGAAACCATGCCTTGTGTTAAGAAGAAGGCTGAT 281599
Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194
||||| | | ||||||| || | | | | ||| || | || || | || | |
Sbjct 281600 TGGGCTCTTCATTGGATCAGCA-GTAAGAATGCAACA-TTCCCAGAACGAGTTGTTGCAT 281657
Query 1456195 TTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAG 1456252
|||| || || || || || || || || || ||||| ||| || |||||||||||||||
Sbjct 281658 TTGCAGCTGTGGAAGGAATTTTCTTTTCAGGAAGTTT-TGCTGCTATCTTTTGGCTCAAG 281716
Query 1456253 AAGCGCGGCCTCATGCCCGGTCT 1456275
|| || || || ||||| || ||
Sbjct 281717 AAACGGGGTCTTATGCCAGGACT 281739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177426550070056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |