Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq218 125 6e-24 seq428 111 1e-19 seq25 87.8 2e-12 >seq218 Length=661058 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 || |||||||| | |||||||| || |||||||||||||| | ||| |||| | || Sbjct 352169 AAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCT 352228 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||| || ||||| ||||| ||||| || |||||||| | ||||| | || |||||| Sbjct 352229 TCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCC 352288 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 |||||| ||||| || | | ||||| | ||| || |||| ||||| ||| Sbjct 352289 TGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTT 352348 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || ||||| ||||| || ||||| Sbjct 352349 TTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Score = 122 bits (134), Expect = 8e-23 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 || |||||||| | |||||||| || |||||||||||||| | ||| |||| | || Sbjct 357250 AAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATCT 357309 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||| |||||||| ||||| ||||| || || ||||| | ||||| | || |||||| Sbjct 357310 TCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCC 357369 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 |||||| ||||| | || | | ||||| || ||| || |||| ||||| ||| Sbjct 357370 TGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATTGTT 357429 Query 35705 TTACCCGTCAAAGTTTTCACAA 35726 ||||| || | || || |||| Sbjct 357430 TTACCAGTTAGTGTCTTAACAA 357451 >seq428 Length=160056 Score = 111 bits (122), Expect = 1e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 || || || |||||||| || || |||||||| ||||||||||| | ||| || || Sbjct 129661 AATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGG 129602 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 | || |||| || || || ||||| || | || || ||||| | |||| | || Sbjct 129601 CCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCT 129542 Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 || || ||| ||| ||||| | || | | || ||| || ||| ||||| | ||| Sbjct 129541 TTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTG 129482 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 || || |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct 129481 ATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCATCCTGTG 129438 >seq25 Length=1883024 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 |||||||| ||||| || || || |||||||| || || | | || || | || Sbjct 1512040 AACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCT 1512099 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || | |||||||| || || || |||| ||| || || | ||||| | |||||||| Sbjct 1512100 TCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCT 1512159 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 ||||| ||| | | || | | ||||| | ||| ||||| | ||||| ||| Sbjct 1512160 TGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTT 1512219 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || || || | |||||||||||| || ||||| ||| Sbjct 1512220 TTTCCGGTAAGAGTTTTCACAAAAATTTGCATGCTG 1512255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450771127939040