Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq218 125 6e-24
seq428 111 1e-19
seq25 87.8 2e-12
>seq218
Length=661058
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|| |||||||| | |||||||| || |||||||||||||| | ||| |||| | ||
Sbjct 352169 AAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCT 352228
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|||| || ||||| ||||| ||||| || |||||||| | ||||| | || ||||||
Sbjct 352229 TCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCC 352288
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
|||||| ||||| || | | ||||| | ||| || |||| ||||| |||
Sbjct 352289 TGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTT 352348
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || || ||||| ||||| || |||||
Sbjct 352349 TTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 122 bits (134), Expect = 8e-23
Identities = 148/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|| |||||||| | |||||||| || |||||||||||||| | ||| |||| | ||
Sbjct 357250 AAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATCT 357309
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|||| |||||||| ||||| ||||| || || ||||| | ||||| | || ||||||
Sbjct 357310 TCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCC 357369
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
|||||| ||||| | || | | ||||| || ||| || |||| ||||| |||
Sbjct 357370 TGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATTGTT 357429
Query 35705 TTACCCGTCAAAGTTTTCACAA 35726
||||| || | || || ||||
Sbjct 357430 TTACCAGTTAGTGTCTTAACAA 357451
>seq428
Length=160056
Score = 111 bits (122), Expect = 1e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
|| || || |||||||| || || |||||||| ||||||||||| | ||| || ||
Sbjct 129661 AATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGG 129602
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
| || |||| || || || ||||| || | || || ||||| | |||| | ||
Sbjct 129601 CCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCT 129542
Query 35639 TTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698
|| || ||| ||| ||||| | || | | || ||| || ||| ||||| | |||
Sbjct 129541 TTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTG 129482
Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742
|| || |||||||| ||||| ||||| ||||| ||||| |||||
Sbjct 129481 ATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCATCCTGTG 129438
>seq25
Length=1883024
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|||||||| ||||| || || || |||||||| || || | | || || | ||
Sbjct 1512040 AACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCT 1512099
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|| | |||||||| || || || |||| ||| || || | ||||| | ||||||||
Sbjct 1512100 TCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCT 1512159
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | || | | ||||| | ||| ||||| | ||||| |||
Sbjct 1512160 TGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTT 1512219
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| || || | |||||||||||| || ||||| |||
Sbjct 1512220 TTTCCGGTAAGAGTTTTCACAAAAATTTGCATGCTG 1512255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450771127939040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |