Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq310 545 3e-150 seq12 410 2e-109 >seq310 Length=366558 Score = 545 bits (604), Expect = 3e-150 Identities = 1246/1858 (67%), Gaps = 33/1858 (2%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || |||||||| | || ||| |||||||| ||||||| || ||||||| || ||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 68455 TGCATACTTGTTAGT--TTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGAC 68512 || || | | | ||| ||| |||| | | ||||||||||| | || || | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 68513 TTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAAT-ACTCTTTTGAGGAATT 68571 | || || || || ||||| | |||||||||||| |||| ||| ||| || || | |||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACT-TTCTGTGAAATT 100715 Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATG 68628 ||||| | ||| ||| | |||| ||| |||||||| |||| | | |||||||||| Sbjct 100716 TCCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATT 100775 Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688 || |||| || || | || || || ||| | |||| ||||| | | ||| || Sbjct 100776 GAGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTC 100835 Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748 ||| ||||||| | ||| | || || | |||||| |||||||| || | | || Sbjct 100836 AAATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTA 100895 Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808 || | ||| || |||||||| |||||||||||||| |||| |||||| || ||||| Sbjct 100896 TATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAA 100955 Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCT 68868 || || ||||| || || | | ||| |||||||| ||| | | ||||| || Sbjct 100956 GCGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCT 101015 Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928 || | | ||||||||| | || | || |||||| | ||| || |||| | Sbjct 101016 TTCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAA 101075 Query 68929 ATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || ||| || || | ||| || |||||| || || | || || | | Sbjct 101076 ATCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 ||||| ||||| || | |||||||||||| | ||||||||||| | | ||| || | Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTC 101195 Query 69049 TGTGCTTCTAGACTATC-GAATGGATA--ATGTAAAAGAATAAATGCATCTGCCAATCCC 69105 ||||| | || || || ||| | |||| |||||| ||||| || || || Sbjct 101196 GCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAA---AATAAAAGCATCGGCTAAACCT 101252 Query 69106 TGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGA 69165 || || || || || || ||||| || ||| |||||| ||| || ||||| | ||| Sbjct 101253 TGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGA 101312 Query 69166 TAATAATTAATATCTATAATTTTATTAAG--ATTTCGGACTACTACTTTAACCACGTCCT 69223 |||||||||| || |||||||| || || ||||| | || ||||| | || | Sbjct 101313 TAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTA--ACAACTTTGGTGATTTCTT 101370 Query 69224 TTAGTTTGAGAAAATC---AAATCGTCCATC---TATAACAAACATATTCAGTGCTACAG 69277 ||| || |||||| || || ||| | ||||||||||||| ||| | | Sbjct 101371 TTAACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCG 101430 Query 69278 ATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATA 69337 |||| | |||||| || || || || | || | ||||| | || ||||| |||| Sbjct 101431 ATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATA 101490 Query 69338 GATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCT 69397 ||| || | | | || || || | ||||| ||||| || ||| |||| || || || | Sbjct 101491 AATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTT 101550 Query 69398 TGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGA 69457 | || || || || ||||| |||||||| | ||||| | || |||| | ||| | Sbjct 101551 TATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATT 101610 Query 69458 CCCTAGCATTTATTACGGTCTTGTA---ACGCTTCTCTTTTTCATATTGTGTATATAGCC 69514 | |||| || | | |||| || || ||| |||||| | | ||| | | Sbjct 101611 TCTGAGCAGGTACTTGAGAAATGTATTTAC-CT--TCTGCTTCATACTTTTCATACAACT 101667 Query 69515 GTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATG 69574 |||| || | ||||||||| ||| | | ||| ||||||| || |||||||||| || Sbjct 101668 GTTCAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTG 101727 Query 69575 ACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAA 69634 |||| ||| | | ||||| ||||||||| | ||| || ||||| || || || Sbjct 101728 ACCAGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAA 101787 Query 69635 AGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCA 69694 | | |||||| | ||| | ||||| ||||||||||||||||| | || | ||| || | Sbjct 101788 ACAAATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAA 101847 Query 69695 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTC 69754 || || | |||||||||||| ||||| || || | | || |||| || || |||| Sbjct 101848 ATATGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTC 101907 Query 69755 CCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAG 69814 | ||||||| |||||||| |||||| | || | ||||| |||| | ||| || | Sbjct 101908 CTTGATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCG 101967 Query 69815 ATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGAC 69874 | | || || || || | || |||| ||| | || || ||||| | || | Sbjct 101968 AAGTGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGC 102027 Query 69875 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCT 69934 | | || |||||| |||||| || ||||||| |||| | | | || || | Sbjct 102028 CCAAACCACCTGCCGATTTAGAAATGAGAGCACTTGTAGTCAAACATTTACAAATGCCTT 102087 Query 69935 CTATGCTATCATCTATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 | ||||||||||| || || || ||| ||||| || | ||| | | | || Sbjct 102088 CAATGCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAAGCTGAGGTCTTGTGGTC 102146 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || || || | |||||| ||| || ||||| || || || | | |||||| Sbjct 102147 CCAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTAC 102206 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 ||||| || || | |||||||| | ||||| || | || || ||||| | ||| Sbjct 102207 GTTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATG 102266 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 || ||||||| ||| || |||| || | |||||| || || || ||| | |||| Sbjct 102267 TGTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTT 102326 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTT 70231 ||||| |||||||| ||||| ||||| || | || || | ||||| ||||| |||| Sbjct 102327 TTAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 >seq12 Length=2314596 Score = 410 bits (454), Expect = 2e-109 Identities = 643/916 (70%), Gaps = 7/916 (1%) Strand=Plus/Minus Query 39317 ACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 39376 ||||| || ||||| |||||||| || || || || ||||| || ||||| || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 39377 GATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAAT 39436 || || || | ||| || ||||||||||| | ||||||| | || | | | || || Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 39437 TCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATT 39496 ||| | | | || || |||||||| || || ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 39497 CCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT 39556 || || || | || || | ||| || |||| ||| || | ||| || | || || || Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 39557 GTTATTATCGATGTTACTACCTCATCACTCGGTGGATG--CAATAAATGTTTAAACATTA 39614 ||||| ||||||| ||| | ||| || ||||| | | |||||||| Sbjct 281856 CGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGA--AAACATTA 281799 Query 39615 AGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGA 39674 | || || || |||||||| | || ||||| | | ||| | || ||||||||||| | Sbjct 281798 AACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCA 281739 Query 39675 GTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGA 39734 |||| ||||| ||||| || || ||||||||||| || ||||||||| ||| ||||||| Sbjct 281738 GTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGA 281679 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA-TGT 39793 | || ||||| || |||||||||||||||| || ||| | | ||| || ||| || Sbjct 281678 AAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGC 281619 Query 39794 --ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | | ||||||||||| |||||||| ||||||||||| ||||| ||||||| Sbjct 281618 TGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCAT 281559 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | || ||| | | ||| || || || | ||| || || || | |||||||| Sbjct 281558 TGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACA 281499 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 ||||||||||||| |||||||| || || || || || ||||| || | || ||||| | Sbjct 281498 TTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTA 281439 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||||| ||| || ||||| || | | |||||||| || ||||||||| || | Sbjct 281438 CTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAG 281379 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGT 40091 ||||||| || | ||||||| ||| |||| ||||||| || ||| |||| ||||| Sbjct 281378 CAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGT 281319 Query 40092 CATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTT 40151 | || || || | ||||||||||| | |||||| || || || || || | | Sbjct 281318 GGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCT 281259 Query 40152 TGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 ||||| | | ||| || || ||||||| || ||||| || || || || ||||||||| Sbjct 281258 TGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTTT 281199 Query 40212 TTGCAAGGATGGGTTC 40227 | ||| | ||||| Sbjct 281198 CTCTAAGCAATGGTTC 281183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686874557596320