Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq310 282 4e-71
seq218 127 2e-24
seq25 107 2e-18
>seq310
Length=366558
Score = 282 bits (312), Expect = 4e-71
Identities = 959/1465 (65%), Gaps = 52/1465 (4%)
Strand=Plus/Plus
Query 130805 GTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATG 130864
||| | ||||| | ||||| || || || || ||||| ||||| | ||||| |||||
Sbjct 100908 GTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAGCGGTAGGCATT 100967
Query 130865 TATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTT-CAATTCATC 130923
|| | | || ||||| | || ||||| | | | ||||| ||||| ||| || |
Sbjct 100968 GGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTT-CGCTTTCAAAGCACC 101026
Query 130924 CCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTT 130983
||||||||| | || || | || |||||||||||| | |||| || || ||
Sbjct 101027 CCAATCCCACAAGTCTGTGGGAGTT---TTATTCCACATATCATACTGTAAAATCCCCTT 101083
Query 130984 ACTGGCGGGACTGGATTCGAACG----ATTCGTAGATTCCTTCGACACGAGCCAGGTCGT 131039
|| | ||||| ||| | | || | | || ||| ||| ||
Sbjct 101084 GCTTACAGGACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT----TCAC 101139
Query 131040 TGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCG 131099
||| ||||| | || |||||||| | |||||| |||||||| ||| | ||||||
Sbjct 101140 AGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAA---GTTTCG 101196
Query 131100 C---TTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTA 131156
| || ||| || |||| | | |||||||||||| || || | ||| ||||
Sbjct 101197 CAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAAATAAAAGCATCGGCTAAACCTTGTA 101256
Query 131157 TCCCAACGCCCACCGGTCTATGTTTTAAATTACA--TTTACGCGAACATTCGGT--GGGA 131212
|| | || | |||||| || | | ||| | ||| || | ||| ||||
Sbjct 101257 CACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCC----TCTGGTACGGGA 101312
Query 131213 TAAAGGTTAATGTCAATTATTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTC 131272
||| |||| ||| || |||||||||| || | |||| || |||| |||
Sbjct 101313 TAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTT 101372
Query 131273 AATTTGTCGAAATCAAACGTGCCAGTTTCGAGGTTTACAAATTGATTTACACATATTGAC 131332
|| || | ||||| | | | ||| | ||||||| ||| || | ||
Sbjct 101373 AACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGAT 101432
Query 131333 GCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAA 131392
|||| |||||| || || ||||||| ||| | ||||||||| | ||| |||
Sbjct 101433 GCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAA 101492
Query 131393 TTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTT 131451
|| ||||| | || || || || ||||||||||||||||| || |||| || ||
Sbjct 101493 TTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTG-CATGCATCTTT 101551
Query 131452 GTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAAT-GTATCGAAAGAGTT 131510
|| | |||| | || || || ||||||||||||| |||| || | || | | | ||
Sbjct 101552 ATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCAT-GCCACAATT 101610
Query 131511 TTCGAGCAGACAATTGATATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTT 131570
| |||||| | |||| | |||||| || | ||| || ||||| |||||| ||
Sbjct 101611 TCTGAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTT 101670
Query 131571 CAAAGTTTTGGCCAAACGAACTGTCC-AAATT--GGGACATTCGCTG-GGACACATTAGC 131626
|||| |||| || | || | || ||| | |||||||| | || |||||||| ||
Sbjct 101671 CAAACTTTTCTCC---CCAATTATCGTAAAGTCCGGGACATT-GATGAGGACACATCAGT 101726
Query 131627 GACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTAC 131686
||||| || || |||||||||| |||||||||||||| || | ||||| || ||
Sbjct 101727 GACCAGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAA 101786
Query 131687 AACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCC 131746
|||| |||||| ||| | |||||||| | || || ||||||||||||||||||| ||
Sbjct 101787 AACAAATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCA 101846
Query 131747 AAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCC---TTTGCGCTTACCG 131803
|| ||||| |||||||| ||||| | ||| | || | || || | | |||||
Sbjct 101847 AATATGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCT 101906
Query 131804 CCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTG 131863
||||||| |||| | | | || || | || || | ||| || | ||||||||
Sbjct 101907 CCTTGATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTC 101966
Query 131864 GCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGT 131923
| | || ||||||| ||| | || || || || | || ||||| ||| | |
Sbjct 101967 GAAGTGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATG 102026
Query 131924 CCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACC 131982
|| | ||| || |||| ||||||| || || || | | | || | | ||| | || ||
Sbjct 102027 CCCAAACCACCTGCCG-ATTTAGAAATGAGAGCACTTGTAGTCAAACATTTACAAATGCC 102085
Query 131983 TTCCACGCTGTCCGC-GGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAAT- 132040
||| | ||| || | |||| || | || || || || || || | ||| ||| |
Sbjct 102086 TTCAATGCTATCATCAGGCATTG-CTACCAAGAAACACGATGAAAGCTG-AGGTCTTGTG 102143
Query 132041 GTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGA 132100
|| || ||||| |||| || || || || ||||| |||| | | | ||| |
Sbjct 102144 GTCCCAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTG 102203
Query 132101 TACGATTGTATAGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATGTAC 132160
|||| || ||| |||| || ||||| || ||| || || || ||||| |
Sbjct 102204 TACGTTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGC 102263
Query 132161 ATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATA--ACCGTTTTCCA 132218
||||||||| | ||| | |||| |||| || ||| | | ||| | || ||| |
Sbjct 102264 ATGTGTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACG--TTCTA 102321
Query 132219 AAGTTTTGAAACCAAAATATTTGTA 132243
||||||| ||||||||||| |||||
Sbjct 102322 AAGTTTTAAAACCAAAATAATTGTA 102346
>seq218
Length=661058
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || || | || ||||||||||||||| ||||| || || |||||||| || ||
Sbjct 355998 CCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAA 356057
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || | ||||| | |||||| ||||| |||| ||||| |||||||| || ||
Sbjct 356058 AGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG 356117
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| ||| || || || || ||| ||| | | |||||| || || | |||| || ||
Sbjct 356118 ATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGC-TCTAC 356176
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| || ||||||| ||| || || | ||||| || ||||||||||||
Sbjct 356177 TTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 356225
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || ||||| | || || |||||||||||||||||||| | | |||| |
Sbjct 356238 CGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA 356297
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | ||| || || || |||| ||||| ||||| || || || | ||| || ||
Sbjct 356298 TCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 356357
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTAT 27211
|| || || ||| | | |||| | || || | |||| |||||||||||||| ||
Sbjct 356358 TCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGC-TCAACTTCTAGAGTGAT 356416
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| || || || ||||| || |||||||| |||||
Sbjct 356417 GGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|| || |||||||| | ||| ||||| ||||| ||||| || || | | |
Sbjct 352166 CGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCA 352225
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | ||||||||||| |||| | ||| || || || || || | ||| |||||
Sbjct 352226 TCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTG 352285
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| |||| | |||| | ||||||| | ||| ||||| || || ||
Sbjct 352286 TCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATG 352345
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || || | ||||| ||||| ||||||||
Sbjct 352346 GTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| | ||| | | ||||||||| | || || |||||||||||||| || |||
Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || | ||||| || ||||| || || | || | | ||| ||||| || ||
Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || ||||| || || || ||| | | || | || |||| | |||||||
Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACT 356633
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
|||| ||| || | ||| || || || || ||||| || ||||||||| || ||
Sbjct 356634 TCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCATACCTCCT 356687
>seq25
Length=1883024
Score = 107 bits (118), Expect = 2e-18
Identities = 165/234 (71%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| | || || || ||||| ||||| || || ||||| ||||| || |||||
Sbjct 1512025 CCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAA 1512084
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||| | || ||||| ||| |||| | | ||||||||| || ||
Sbjct 1512085 AGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGA 1512144
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| || || || ||||| || | |||| | ||||||| || ||||||
Sbjct 1512145 ATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACC 1512204
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254
|| || || || | ||| || || |||||||||||||| |||||||| ||||||
Sbjct 1512205 TCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT-GCTGCT 1512257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424913746594656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |