Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq169 145 6e-30 >seq169 Length=813669 Score = 145 bits (160), Expect = 6e-30 Identities = 324/482 (67%), Gaps = 7/482 (1%) Strand=Plus/Plus Query 111814 TAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGA 111873 ||||| ||||| || |||||||| || || |||||||| | ||||||||||| || Sbjct 304322 TAACTGGCAATATTGAATGGCACTCCAAGACCCATATCAGCTGATCTTTGATACAGTAAG 304381 Query 111874 CATGATAGTTTATTTTGTGACACATAAAATTG-ACAAAGTACATGACAAGGAGGCAATGC 111932 || || |||| | || ||| | || || |||| | | || |||||||| | || Sbjct 304382 CAGGAAAGTTCTCCATTTGCAACAAAGAACTGCACAAGGCAG-TGGCAAGGAGGTAGAGC 304440 Query 111933 CATCCCATTCAT----AAAGGGTCCCCATGCACACATGATCATCCTTCTGCTGTAGCGAT 111988 ||| | || | ||||| || | |||||||| || ||||| | |||| ||| Sbjct 304441 CATTAAAGGTATGTCAATAGGGTTCC-AGGCACACATAATAATCCTACGACTGTTTGGAT 304499 Query 111989 TATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAATCCG 112048 | | | |||||| | ||| ||||| || ||||| || |||| |||| | || || | Sbjct 304500 TGTCCTTAATGTCTTTTATTACATTATTTAGTTGGTCAATGCCTTCACCACTGTAGTCAG 304559 Query 112049 CCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCA 112108 | || ||| | ||| |||||| |||||||||| ||||||||||| | ||| |||| Sbjct 304560 CATGCATTCCTCTATATTCAGCCCCAAAGTGTCTCCACTGGAATCCATAGACAGGTCCCA 304619 Query 112109 GATCTCCCGGGGCTGTATCTGGAAATTGCTCTCTATTCAACAAATCACTTCTAATATGAG 112168 ||| || | | ||| ||| | || | || || | | ||| | Sbjct 304620 AATCGCCTTCTTCCCTTTCTTTAAAACCTAAACCATCTAGAAACTCTCGAGAACTATTTG 304679 Query 112169 GATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAA 112228 ||| |||||| | || |||| || || |||| ||| ||||||| || |||||| Sbjct 304680 GATCCCAAATGTGAACATCTTTCTCTGCTAGCTCTTTTGAATTTGTGCTACCCTTAATAA 304739 Query 112229 ACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAA 112288 |||| || |||||||| || || ||| |||| | || ||||| || || |||| |||| Sbjct 304740 ACCACAGTAATTCTTCAACCACTCCTCTCCAAAATACCCTTTTTGTTGTAAGCAAAGGAA 304799 Query 112289 AA 112290 || Sbjct 304800 AA 304801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391926549974044