Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq218 208 9e-49
seq25 134 2e-26
seq428 131 2e-25
seq12 95.1 1e-14
>seq218
Length=661058
Score = 208 bits (230), Expect = 9e-49
Identities = 183/228 (80%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| ||||| ||||| || ||||| || ||||| || |||||| ||
Sbjct 356453 AATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTGAGCCATC 356394
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| ||| | || ||||||||||| |||||||| || ||||||||||||||
Sbjct 356393 TGATACAATTGAAAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 356334
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| ||||||||||||||||| ||||| | || |||| ||| ||||| | ||||| ||
Sbjct 356333 ACAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACAA 356274
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | ||||| ||||| ||||| ||| |||| |||||||| | |||||
Sbjct 356273 TATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCGTCTCAGAGGTGG 356226
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| ||||| || | || || || ||||| || ||||| || ||| || |
Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | || || |||||||| |||||||| || || || ||||| ||
Sbjct 356164 GATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 356105
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| |||||||| || || || | || |||| || ||||| |||| ||||||
Sbjct 356104 CAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAAT 356045
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || |||||||| || | ||| | || ||| | ||||| |||||
Sbjct 356044 ATTCAGAAGGAATCTACATTACATTTGGTATTGAGGCTTCGAGGTGG 355998
Score = 143 bits (158), Expect = 3e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || || || || || ||| | || ||||| ||
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || || |||||||| ||||| || || ||||| ||||| |||
Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAG 356561
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | |||| ||||| || || ||||| || |||| ||||||||| | || ||||||
Sbjct 356560 CAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAAT 356501
Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609
| ||||| ||||||||||| |||
Sbjct 356500 ATTCAAAAAGAATCCACTCTCCAT 356477
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| ||||| || || || || || || || |||||||| || |
Sbjct 356909 AATGCAGATTTTTGTTAAGACACTAACTGGTAAAACAATCACCCTTGAGGTAGAACCGTC 356850
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | || | || | |||||||||||||| || || ||||| ||||| ||||||||
Sbjct 356849 TGACACAATAGAGAACGTAAAGGCTAAAATTCAAGATAAAGAGGGTATTCCACCAGACCA 356790
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | ||||||||||||| ||||| || || |||| | | || | | || || ||
Sbjct 356789 ACAAAGATTAATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACATTGTCTGATTACAA 356730
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||| |||||| |||| ||||||||| | || ||
Sbjct 356729 CATCCAGAAAGAATCCACCCTTCATTTAGTTTTGCGTCTTAGAGGAGG 356682
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || ||| | || || || || || || || || || || ||
Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| |||||||||| || |||||||| || || |||||||||||||||
Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | |||||||| ||||| ||| | || |||| | | || | | || || ||
Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || || || || || ||| | || || |||||| | ||||||
Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACGTCTTAGAGGTGGA 352153
Score = 109 bits (120), Expect = 6e-19
Identities = 157/220 (71%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTCAGGTGATAGCA 27472
|||| ||||| || || || || || || || || || || || ||||| | | |
Sbjct 357451 TTGTTAAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAG---ACACAA 357395
Query 27473 TTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTC 27532
||| |||| ||||||| || || |||||||| || || |||||||||||||| || |||
Sbjct 357394 TTGAAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTT 357335
Query 27533 TAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAA 27592
| |||||||||||||||||| | || |||| | | || | | || || || | || |
Sbjct 357334 TGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGA 357275
Query 27593 AGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || || ||| | || || |||||||| || ||
Sbjct 357274 AAGAGAGTACCCTCCATTTGGTTTTACGTCTTCGTGGAGG 357235
Score = 82.4 bits (90), Expect = 9e-11
Identities = 97/130 (75%), Gaps = 6/130 (5%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTC 27461
|||||| || ||||| ||||| || || || || || || || || || || || |||
Sbjct 352153 AATGCAGATTTTTGTTAAGACACTAACTGGAAAAACCATCACACTGGAAGTAGAACCGTC 352094
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|| | | |||| |||| ||||||| || || |||||||| || || |||||||||||
Sbjct 352093 AG---ACACAATTGAAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGA 352037
Query 27522 CCAGCAGCGT 27531
||| || |||
Sbjct 352036 CCAACAACGT 352027
>seq25
Length=1883024
Score = 134 bits (148), Expect = 2e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || |||||||| || || || || ||||||||||| |
Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || ||||| |||||||| || |||||||| || ||
Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | ||||||| |||||||||||| | || |||| ||||| || | ||||||||
Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072
Query 27586 GTCCAAAAGGAATCCAC 27602
| || || ||||| ||
Sbjct 1512071 ATTCAGAAAGAATCGAC 1512055
>seq428
Length=160056
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || ||||| || ||| | ||||| || |
Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| ||||||| ||||| || || || || |||||||| || |||||
Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||||||||||||||| || ||| | || |||| ||||| | | || || ||
Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
||||||||||||| || | ||| | |||||
Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTT 129655
>seq12
Length=2314596
Score = 95.1 bits (104), Expect = 1e-14
Identities = 298/449 (66%), Gaps = 31/449 (7%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGG--GTCATTCTGTTCTATTTTCTGGC 64783
|| ||||| ||||||||||||||||||||| || || | ||| |||| || ||||
Sbjct 281654 GCATTTGCAGCTGTGGAAGGAATTTTCTTTTCAGGAAGTTTTGCTG--CTATCTTTTGGC 281711
Query 64784 TAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACG 64843
| || || ||||| || |||||||| ||| | ||||| || ||||| || ||||| || |
Sbjct 281712 TCAAGAAACGGGGTCTTATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGCGATG 281771
Query 64844 AGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTC--AGCCACCTCAAGGACAAACCA 64899
| || | || || ||||| | ||| | ||| | |||| ||||||
Sbjct 281772 AAGGTTTGCATTGTGATTTTGCTTGTTTAATGTTTTCTTATATTGTTCAA----AAACCA 281827
Query 64900 TCACATGGGACTATAATTGATATAGTAAAATCG----GCTGTAGAAATTGAAAAGGAATT 64955
||| | | | ||| ||||| || ||| || || |||||||| |||||||
Sbjct 281828 TCAAAAGAGCGAGTAACAGATAT----AATTCGCGATGCAGTTAAAATTGAACAGGAATT 281883
Query 64956 CATTACTGCCGCGCTTCCGTGT-CGTCTCATCGGCATGGATGCCGATAAGATGAAACAGT 65014
| |||| || || | ||| | || || || ||| || | | |||| ||||
Sbjct 281884 TTTAACTGATGC-TTTGCCTGTAAGCCTAATTGGTATGAATTGCAAACTGATGTCTCAGT 281942
Query 65015 ATATCGAATTTGTAGCAGATCGCCTGCTTACT-CAGTT---TGGTATTAAGCCCTACTGG 65070
|||||||||||||||| || || || ||| | |||| | || |||| ||
Sbjct 281943 ATATCGAATTTGTAGCTGACCGTCT-TTTAGTAGAGTTGGGTTGTGATAAGATTTA---T 281998
Query 65071 AATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTT 65130
||| | ||||| ||||||| ||| | | || | || || ||||| || ||
Sbjct 281999 AATGTTAAGAATCCGTTTGACTTTATGAACAAAATTTCCACTGATGGCAAGACAAATTTC 282058
Query 65131 TTTGAAAAGAGGGTAGGTGATTACTCAAA 65159
|||||||||| |||||||| || |||||
Sbjct 282059 TTTGAAAAGAAAGTAGGTGAATA-TCAAA 282086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570281970026560
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