Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq296 134 1e-26 >seq296 Length=775295 Score = 134 bits (148), Expect = 1e-26 Identities = 347/522 (66%), Gaps = 10/522 (2%) Strand=Plus/Minus Query 29919 TGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAG 29978 |||| | ||| || | |||| || ||||| || ||||| |||||| ||| ||||||| Sbjct 25944 TGTGTATAAATTCGCTGGGTTTTAAACCGGTCACATGAGCTATCATGACCGTTAGGAGAG 25885 Query 29979 AGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCT 30038 ||| || || ||||| || |||||||| || ||||| || |||| || ||||| | | Sbjct 25884 CGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCATATCGGCCGATCTTTGGTATAACA 25825 Query 30039 GACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCG-TGGCACGGAGGAAGA 30097 | || | || | | | ||| |||| || || | | || || || |||||| Sbjct 25824 ACGAAGACAATTCGTCATTATTTACGAAAAATTGT-ACGAGACAATGACAGGGTGGAAGA 25766 Query 30098 GCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGG 30157 ||||| | | ||| || ||||| | || | ||| || | || || | || Sbjct 25765 GCCATTTGTGGTATGTCCACAGGATTCCACGAACATAAGATTATCCTTCTATCATTCGGA 25706 Query 30158 TTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC--CATCCCCGAGTAGT 30215 | || |||| | | | | || ||||| | || ||| | || || | Sbjct 25705 TAATTTTTGATTGTATTAATCACTTGACTCAATTGATCGATTCCTTCATTCGCG--TAAT 25648 Query 30216 CTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTC 30275 || | |||| | | ||||| ||||| ||||| | |||||| ||||| || | ||| | Sbjct 25647 TGGCTCGCATGCCTCTATACTCAGCTCCAAAATGACGCCACTGAAACCCATATATCGGAC 25588 Query 30276 CCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGT 30335 ||| |||||||||||| | || | | || ||| | | |||||| | || || |||| || Sbjct 25587 CCAAGTCTCCCTCTTCTCGGTCCCCAAACCCCATTCTATCCAAATACTCCCTCGAACTGT 25528 Query 30336 TGGCGTCCCAGATCTTTACCCCCTTCT--CAGAGAGCTCTTTGGAGTTTGTGGACCCTCT 30393 || | ||||| || |||| | |||| ||| || ||||||| |||||| ||| | Sbjct 25527 TGACATCCCATATTTTTA--CGTTTCTGGTAGAAAGTTCTTTGGCATTTGTGCTTCCTTT 25470 Query 30394 GACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30435 | |||||||||| |||||| || ||| | ||||||||| Sbjct 25469 TATTAACCACAGCATCTCCTCGACTACGCCACGCCAAAAGAC 25428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406290651790896