Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq296 134 1e-26
>seq296
Length=775295
Score = 134 bits (148), Expect = 1e-26
Identities = 347/522 (66%), Gaps = 10/522 (2%)
Strand=Plus/Minus
Query 29919 TGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAG 29978
|||| | ||| || | |||| || ||||| || ||||| |||||| ||| |||||||
Sbjct 25944 TGTGTATAAATTCGCTGGGTTTTAAACCGGTCACATGAGCTATCATGACCGTTAGGAGAG 25885
Query 29979 AGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCT 30038
||| || || ||||| || |||||||| || ||||| || |||| || ||||| | |
Sbjct 25884 CGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCATATCGGCCGATCTTTGGTATAACA 25825
Query 30039 GACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCG-TGGCACGGAGGAAGA 30097
| || | || | | | ||| |||| || || | | || || || ||||||
Sbjct 25824 ACGAAGACAATTCGTCATTATTTACGAAAAATTGT-ACGAGACAATGACAGGGTGGAAGA 25766
Query 30098 GCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGG 30157
||||| | | ||| || ||||| | || | ||| || | || || | ||
Sbjct 25765 GCCATTTGTGGTATGTCCACAGGATTCCACGAACATAAGATTATCCTTCTATCATTCGGA 25706
Query 30158 TTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC--CATCCCCGAGTAGT 30215
| || |||| | | | | || ||||| | || ||| | || || |
Sbjct 25705 TAATTTTTGATTGTATTAATCACTTGACTCAATTGATCGATTCCTTCATTCGCG--TAAT 25648
Query 30216 CTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTC 30275
|| | |||| | | ||||| ||||| ||||| | |||||| ||||| || | ||| |
Sbjct 25647 TGGCTCGCATGCCTCTATACTCAGCTCCAAAATGACGCCACTGAAACCCATATATCGGAC 25588
Query 30276 CCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGT 30335
||| |||||||||||| | || | | || ||| | | |||||| | || || |||| ||
Sbjct 25587 CCAAGTCTCCCTCTTCTCGGTCCCCAAACCCCATTCTATCCAAATACTCCCTCGAACTGT 25528
Query 30336 TGGCGTCCCAGATCTTTACCCCCTTCT--CAGAGAGCTCTTTGGAGTTTGTGGACCCTCT 30393
|| | ||||| || |||| | |||| ||| || ||||||| |||||| ||| |
Sbjct 25527 TGACATCCCATATTTTTA--CGTTTCTGGTAGAAAGTTCTTTGGCATTTGTGCTTCCTTT 25470
Query 30394 GACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30435
| |||||||||| |||||| || ||| | |||||||||
Sbjct 25469 TATTAACCACAGCATCTCCTCGACTACGCCACGCCAAAAGAC 25428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406290651790896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |