Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq169 150 1e-31
>seq169
Length=813669
Score = 150 bits (166), Expect = 1e-31
Identities = 379/571 (66%), Gaps = 19/571 (3%)
Strand=Plus/Plus
Query 118573 TAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGG 118632
|| ||||| | ||| || || || || |||||||| || |||||||| || |||| | |
Sbjct 304322 TAACTGGCAATATTGAATGGCACTCCAAGACCCATATCAGCTGATCTTTGATACAGTAAG 304381
Query 118633 CAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACC 118692
|| || || || || ||||||||| | ||||| | | ||| || ||||| ||| ||
Sbjct 304382 CAGGAAAGTTCTCCATTTGCAACAAAGAACTGCACAAGGCAGTGGCAAGGAGGTAGAGCC 304441
Query 118693 ATGGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATGCCTTCTGCTATATGGTTCT 118752
|| || | | ||| |||||||| | || | ||| | || | ||| |
Sbjct 304442 ATTAAAGGTATGTCAATAGGGTTCCAGGCACACATAATAATCCTACGACTGTTTGGATTG 304501
Query 118753 ACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGAC 118812
||| || | | |||| ||| | | || || | || | ||| | || | ||
Sbjct 304502 TCCTTAATGTCTTTTATTACATTATTTAGTTGGTCAATGCCTTCACCACTGTAGTCAGCA 304561
Query 118813 TCGCAT-CCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAG 118871
| |||| ||| ||||||| |||||||| |||||| || || ||||| ||||| ||||
Sbjct 304562 T-GCATTCCTCTATATTCAGCCCCAAAGTGTCTCCACTGGAATCCATAGACAGGTCCCAA 304620
Query 118872 ATCTCCCTGGGACCT------AAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCC 118925
||| || | ||| |||| ||||||| || |||| ||| || |
Sbjct 304621 ATCGCCTTCTTCCCTTTCTTTAAAACCTAAACCATCTA------GAAACTCTCGAGAACT 304674
Query 118926 ATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACT 118985
||| | || |||||| ||| |||| | ||| || || || || ||||| ||| ||
Sbjct 304675 ATTTGGATCCCAAATGTGAACATCTTTCTCTGCTAGCTCTTTTGAATTTGTGCTACC-CT 304733
Query 118986 TAA-AAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACA 119044
||| |||||| || | || ||||| || ||||||||||| || |||||||||||| ||
Sbjct 304734 TAATAAACCACAGTAATTCTTCAACCACTCCTCTCCAAAATACCCTTTTTGTTGTAAGCA 304793
Query 119045 GTGGAAA---CTGACCTCTAAGTGAATATCTTGTTTGTGTTCCAAAAATAGACAGAGTCC 119101
||||| | |||| || ||||| | | |||| ||||||||| || || |
Sbjct 304794 AAGGAAAAACGTTTTCTCTCAGGGAATAACGCATCTGTGCTCCAAAAATTCCCATTGTTC 304853
Query 119102 CAACACCTGTTCTATCATCTCTCTTGATACC 119132
| || || || | ||||| || |||||||
Sbjct 304854 CCACCCCAGTACGGTCATCCCTTCTGATACC 304884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414456654873232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |