Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq169 150 1e-31 >seq169 Length=813669 Score = 150 bits (166), Expect = 1e-31 Identities = 379/571 (66%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 118573 TAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGG 118632 || ||||| | ||| || || || || |||||||| || |||||||| || |||| | | Sbjct 304322 TAACTGGCAATATTGAATGGCACTCCAAGACCCATATCAGCTGATCTTTGATACAGTAAG 304381 Query 118633 CAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACC 118692 || || || || || ||||||||| | ||||| | | ||| || ||||| ||| || Sbjct 304382 CAGGAAAGTTCTCCATTTGCAACAAAGAACTGCACAAGGCAGTGGCAAGGAGGTAGAGCC 304441 Query 118693 ATGGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATGCCTTCTGCTATATGGTTCT 118752 || || | | ||| |||||||| | || | ||| | || | ||| | Sbjct 304442 ATTAAAGGTATGTCAATAGGGTTCCAGGCACACATAATAATCCTACGACTGTTTGGATTG 304501 Query 118753 ACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGAC 118812 ||| || | | |||| ||| | | || || | || | ||| | || | || Sbjct 304502 TCCTTAATGTCTTTTATTACATTATTTAGTTGGTCAATGCCTTCACCACTGTAGTCAGCA 304561 Query 118813 TCGCAT-CCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAG 118871 | |||| ||| ||||||| |||||||| |||||| || || ||||| ||||| |||| Sbjct 304562 T-GCATTCCTCTATATTCAGCCCCAAAGTGTCTCCACTGGAATCCATAGACAGGTCCCAA 304620 Query 118872 ATCTCCCTGGGACCT------AAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACCC 118925 ||| || | ||| |||| ||||||| || |||| ||| || | Sbjct 304621 ATCGCCTTCTTCCCTTTCTTTAAAACCTAAACCATCTA------GAAACTCTCGAGAACT 304674 Query 118926 ATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACT 118985 ||| | || |||||| ||| |||| | ||| || || || || ||||| ||| || Sbjct 304675 ATTTGGATCCCAAATGTGAACATCTTTCTCTGCTAGCTCTTTTGAATTTGTGCTACC-CT 304733 Query 118986 TAA-AAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACA 119044 ||| |||||| || | || ||||| || ||||||||||| || |||||||||||| || Sbjct 304734 TAATAAACCACAGTAATTCTTCAACCACTCCTCTCCAAAATACCCTTTTTGTTGTAAGCA 304793 Query 119045 GTGGAAA---CTGACCTCTAAGTGAATATCTTGTTTGTGTTCCAAAAATAGACAGAGTCC 119101 ||||| | |||| || ||||| | | |||| ||||||||| || || | Sbjct 304794 AAGGAAAAACGTTTTCTCTCAGGGAATAACGCATCTGTGCTCCAAAAATTCCCATTGTTC 304853 Query 119102 CAACACCTGTTCTATCATCTCTCTTGATACC 119132 | || || || | ||||| || ||||||| Sbjct 304854 CCACCCCAGTACGGTCATCCCTTCTGATACC 304884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414456654873232