Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq218 170 4e-37
seq25 140 8e-28
seq428 138 3e-27
seq244 87.8 4e-12
>seq218
Length=661058
Score = 170 bits (188), Expect = 4e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||| || |||||||| || || || || | |||||| | |||||||| | ||||
Sbjct 356250 TGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGC 356309
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || || || || ||||||||||| ||||||| ||||||||||| || || ||
Sbjct 356310 TTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTA 356369
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| |||||||| || || ||||| ||||| || |||||||| |||||||| ||
Sbjct 356370 GCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTA 356429
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
|||||||||||||| | |||||||
Sbjct 356430 AGAGTCTTTACAAAGATCTGCATT 356453
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| ||||| ||||| |||||||| ||||| | | ||||| |||||||| ||||||
Sbjct 356706 TGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCATCTTCAAGCTGC 356765
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
||||| || || || | | ||||||||| || |||| || || || || || || ||
Sbjct 356766 TTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTA 356825
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || || |||||||| ||| ||||| || ||||| || || || ||
Sbjct 356826 GCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATTGTTTTACCAGTT 356885
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
|| ||||| ||||| | |||||||
Sbjct 356886 AGTGTCTTAACAAAAATCTGCATT 356909
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | || |||||||| |||||||| || |||||||| | ||||| | ||
Sbjct 356465 TCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACC 356524
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||||| || || ||||| ||||| | | || || || || |||| ||||| ||
Sbjct 356525 ATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTT 356584
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || || ||| ||| || || || || || || || |||||| || | ||||||
Sbjct 356585 GTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGAT 356644
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || ||||| ||||| || || | |||||
Sbjct 356645 CGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| |||||| | || || | || || || |||||| || ||||| ||||| | |
Sbjct 357237 TCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAA 357296
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| || |||||||||| ||||| || || || || | ||||||||||| |||||||
Sbjct 357297 TGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAAT 357356
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||| |||||||||||||| ||||| ||||| || ||||| || ||| || ||
Sbjct 357357 ACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACTTC 357416
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
|| ||||| || || || || || ||||| ||||
Sbjct 357417 CAGTGTGATTGTTTTACCAGTTAGTGTCTTAACAA 357451
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982
|||||| || ||||| ||||| | | || || |||||||||| || || || || ||
Sbjct 352189 CTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAA 352248
Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042
|| | ||||| ||||| ||||||| ||||| |||||||||||||| ||||||||
Sbjct 352249 AATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTT 352308
Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||| || ||||| || ||| || || || ||||| || ||||| || | || || ||
Sbjct 352309 TTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAAC 352368
Query 211103 AAACACCTGCAT 211114
||| | |||||
Sbjct 352369 AAAAATTTGCAT 352380
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || || || || || |||||||| | |||||| | ||||||||||| ||| || ||
Sbjct 356028 GTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATCTTCCAACTGTTTCCCG 356087
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || ||||| |||||||| || || || | ||||||||||| || || || |||
Sbjct 356088 GCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGAATTTTGGCTTTG 356147
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|||||||| || || ||||| || || || || || || || || || || | ||
Sbjct 356148 ACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGTTTTACCAGTTAATGTT 356207
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | |||||
Sbjct 356208 TTGACGAAGATTTGCAT 356224
Score = 105 bits (116), Expect = 2e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||||||||| ||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct 352028 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATT 352087
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
||||| || ||| || || || ||||| || ||||| || || ||||| ||||| | |
Sbjct 352088 GTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAGTGTCTTAACAAAAATC 352147
Query 211110 TGCATT 211115
||||||
Sbjct 352148 TGCATT 352153
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||||||||| ||||||| ||||| |||||||||||||| || |||||||| ||
Sbjct 357109 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAATT 357168
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
||||| || ||| || || || ||||| || ||||| || | || || ||||| |
Sbjct 357169 GTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATT 357228
Query 211110 TGCAT 211114
|||||
Sbjct 357229 TGCAT 357233
>seq25
Length=1883024
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || ||||| || |||||||| || | ||| || | |||||||| | ||||| ||
Sbjct 1512055 GTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCTAATTGCTTACCA 1512114
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
||||| || | | ||||| |||||||||| ||||||||||| || ||||| ||
Sbjct 1512115 GCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTCGCCTTT 1512174
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||| ||||| ||| ||||||||| || ||||| || ||||| || |||||
Sbjct 1512175 ACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCGGTAAGAGTT 1512234
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 1512235 TTCACAAAAATTTGCAT 1512251
>seq428
Length=160056
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | || | || || || ||||||||||| ||||| | | || | ||
Sbjct 129659 TCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCC 129600
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || || || || |||||||||||||| |||| |||||| ||
Sbjct 129599 ATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTT 129540
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||| ||| ||||| |||||||| || || || ||| ||||| | ||||||
Sbjct 129539 ATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGAT 129480
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| | |||||| || || | |||||
Sbjct 129479 GGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
>seq244
Length=378362
Score = 87.8 bits (96), Expect = 4e-12
Identities = 97/129 (75%), Gaps = 3/129 (2%)
Strand=Plus/Minus
Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865
||||||||| ||||| |||||||| || || ||||| | ||||||| || | |||
Sbjct 10585 CCTTCCAAAAAAGCATGGAAGAGGGGGTCAGTCTGCGTTACGTTTTGCGCGATTAAGAAT 10526
Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTAT--- 139922
||||||||| |||||||| | ||||||||||| ||| |||| ||| |||||
Sbjct 10525 GGAAAAGAGACACAACTATGTAAGAAAAGTTGCCGAGGTTGCAACGCAGCTCTTTATAAC 10466
Query 139923 CAAAGACAA 139931
||| |||||
Sbjct 10465 CAATGACAA 10457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159092771679620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |