Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq218 84.2 2e-11 >seq218 Length=661058 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || |||||||||| || || || || ||||||||||| | ||| |||||| | || Sbjct 356013 AATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATCT 356072 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTC 39191 || | |||||| || ||||| |||||||| || || || |||||| | | || ||||| Sbjct 356073 TCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG-ATACCTTCCTTGTC 356131 Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251 ||||| ||||| | | | ||||| | ||| || || | || ||| | Sbjct 356132 TTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGT 356191 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || | ||||| || ||||||||||| Sbjct 356192 TTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| || | | |||||||| || ||| |||||||| ||||||||||||| Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || ||||| || ||||| || | | |||||| || | || Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||||||| | ||| ||| || ||| | || | | ||||| | || || Sbjct 356574 ATGCCTTCTTTGT-CTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAAC 356632 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| |||| || || || || || || || |||||||| Sbjct 356633 TTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429524722473044