Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq218 84.2 2e-11
>seq218
Length=661058
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132
|| |||||||||| || || || || ||||||||||| | ||| |||||| | ||
Sbjct 356013 AATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATCT 356072
Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTC 39191
|| | |||||| || ||||| |||||||| || || || |||||| | | || |||||
Sbjct 356073 TCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG-ATACCTTCCTTGTC 356131
Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251
||||| ||||| | | | ||||| | ||| || || | || ||| |
Sbjct 356132 TTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGT 356191
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| || || | ||||| || |||||||||||
Sbjct 356192 TTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
|||||||| || | | |||||||| || ||| |||||||| |||||||||||||
Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || | || || || ||||| || ||||| || | | |||||| || | ||
Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236
| || ||||||| | ||| ||| || ||| | || | | ||||| | || ||
Sbjct 356574 ATGCCTTCTTTGT-CTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAAC 356632
Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| | ||||| |||| || || || || || || || ||||||||
Sbjct 356633 TTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429524722473044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |