Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq428 158 3e-33
seq218 138 3e-27
seq3988 131 4e-25
seq25 125 2e-23
seq40 120 7e-22
>seq428
Length=160056
Score = 158 bits (174), Expect = 3e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||||| |||||||| | |||||| | |||||||| | || || |||
Sbjct 129640 GTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCCAATTGTTTTCCA 129581
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || || || ||||||||||| || ||||| ||||| || |||||||| ||| ||||
Sbjct 129580 GCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGGATTTTTGCCTTC 129521
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| |||||| || || || | ||| || ||||| ||||| ||||| ||||| |||||
Sbjct 129520 ACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTACCCGTTAAAGTC 129461
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 129460 TTCACGAATATTTGCAT 129444
>seq218
Length=661058
Score = 138 bits (152), Expect = 3e-27
Identities = 155/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| ||||| ||||||||||| | |||||| || | | || | |||||||||| ||||
Sbjct 356250 TGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGC 356309
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|||||||| || || || ||||||||||| || |||||||||||||||||||| || |||
Sbjct 356310 TTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAAT-TTT 356368
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || || ||| || || || || | || || |||| ||||| ||||| || ||
Sbjct 356369 AGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGT 356428
Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714
| ||| |||| || | ||||||
Sbjct 356429 AAGAGTCTTTACAAAGATCTGCATT 356453
Score = 125 bits (138), Expect = 2e-23
Identities = 128/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582
||||| || | |||||||| | ||| ||||| |||||||| | ||||| ||||| ||
Sbjct 357271 TCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATCTTCCAATTGCTTACCAGCAAAA 357330
Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642
|| | ||||||||||| || ||||||||||| ||||| |||||||| ||||||| |
Sbjct 357331 ATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTT 357390
Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || |||||||| | ||| || || | ||||| || || || ||
Sbjct 357391 TCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATTGTTTTACCAGT 357437
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582
||||| || | |||||||| | ||||||||| |||||||| | || || || || ||
Sbjct 352190 TCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAA 352249
Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642
|| | ||||| ||||| || ||||||||||| ||||| |||||||| |||||| |
Sbjct 352250 ATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTT 352309
Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702
|| || |||||||| | ||| || || | ||||| || || || || || ||||| |
Sbjct 352310 TCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACA 352369
Query 225703 AACACTTGCAT 225713
|| | ||||||
Sbjct 352370 AAAATTTGCAT 352380
Score = 123 bits (136), Expect = 6e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | |||||||||||||||||||| | ||| ||||||| | || | ||
Sbjct 356465 TCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACC 356524
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| || || || || || ||||| | | || || || || ||||| ||||| ||
Sbjct 356525 ATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTT 356584
Query 225618 GTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
|||||| || |||||| || ||| || || || ||||| | ||| || ||||| ||||
Sbjct 356585 GTCTTGAAT-TTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGA 356643
Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||| || || || | || || | ||| | ||||||
Sbjct 356644 TCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || ||||||||||| |||| |||||||| | ||| || || |||||||| ||||||
Sbjct 356706 TGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCATCTTCAAGCTGC 356765
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| || || | || ||||||||| || |||||||| || || ||||| || ||
Sbjct 356766 TTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTA 356825
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || || ||||| || | ||| || || | ||||| || || || ||
Sbjct 356826 GCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATTGTTTTACCAGT 356884
Score = 105 bits (116), Expect = 2e-17
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| |||| || | || | || ||||| || || | ||| ||||| | | |||
Sbjct 356004 CGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTT 356063
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | ||| ||||| || || ||||| |||||||| || || || ||||||
Sbjct 356064 CGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCT 356123
Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| || ||| || || || ||| || || || || | || || || |
Sbjct 356124 TCCTTGTCTTGAAT-TTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAG 356182
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || || || || ||||| | ||| | ||||||
Sbjct 356183 GGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 225589 CGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATG 225648
||||||||||| || ||||||||||| ||||| |||||||| ||| || ||| ||
Sbjct 357109 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAATT 357168
Query 225649 GTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACT 225708
|||||||| | ||| || || | ||||| || || || || || ||||| | || | |
Sbjct 357169 GTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATT 357228
Query 225709 TGCAT 225713
|||||
Sbjct 357229 TGCAT 357233
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 225589 CGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATG 225648
||||||||||| || ||||||||||| ||||| |||||||| ||||||| ||| ||
Sbjct 352028 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATT 352087
Query 225649 GTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| | ||| || || | ||||| || || || ||
Sbjct 352088 GTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGT 352128
>seq3988
Length=15942
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 7536 ATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGAT 7595
||| | ||| ||| |||| | || || |||||| |||| || ||||| ||| |||| ||
Sbjct 11336 ATTAATTGGCAATGACCAAATCTATAATGTTATTGTTACTGCTCATGCTTTTATTATAAT 11395
Query 7596 TTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAAT 7655
|||||| | ||||| || |||| ||||| || || ||||| ||||| |||||||||||
Sbjct 11396 TTTCTTCATGGTTATACCTATTATAATAGGGGGATTTGGAAACTGATTGGTTCCTTTAAT 11455
Query 7656 GATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715
| | || || |||||||| ||||| || | | || |||||||| || || |||| ||
Sbjct 11456 GTTAGGGGCACCTGATATAGCTTTCCCCCGAATAAATAATATAAGATTCTGGCTACTCCC 11515
Query 7716 GCCTTCCTTA 7725
|| || |||
Sbjct 11516 TCCCTCTTTA 11525
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| || |||||||||||||| || | |||||||||||| ||||| || ||||| || |
Sbjct 11924 TTCGGGGTGACCAAAAAATCAAAAGAGATGTTGATAAAGAATAGGGTCTCCTCCTCCAGC 11865
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
|| ||||| || ||||| || |||| ||| |||||||
Sbjct 11864 CGGGTCAAAGAATGATGTATTTAAGTTTCGATCTGTTAAAA 11824
>seq25
Length=1883024
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| |||||||| || | || || || | | ||| | |||||||||| ||||| |||
Sbjct 1512055 GTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCTAATTGCTTACCA 1512114
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
||||| || | | ||||| || || |||||||||||||||||||| ||||| |||
Sbjct 1512115 GCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTCGCCTTT 1512174
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| |||||| |||||||||| ||| || || | ||||| || || || || | ||||
Sbjct 1512175 ACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCGGTAAGAGTT 1512234
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 1512235 TTCACAAAAATTTGCAT 1512251
>seq40
Length=1615507
Score = 120 bits (132), Expect = 7e-22
Identities = 137/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 7542 TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTT 7601
||| ||| |||| | || || || ||| |||| || || || ||| ||| ||||||||
Sbjct 705864 TGGCAATGACCAAATCTATAATGTCATTGTTACTGCTCACGCTTTTATTAAAATTTTCTT 705805
Query 7602 TTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGG 7661
| ||||| || | || ||||| || || ||||||||||| || ||||||||| | ||
Sbjct 705804 CATGGTTATACCTATCATAATAGGGGGATTTGGAAATTGATTAGTCCCTTTAATGTTAGG 705745
Query 7662 TGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721
|| |||||||| ||||| || | | || |||||||| || |||||||| || || ||
Sbjct 705744 GGCACCTGATATAGCTTTCCCTCGAATAAATAATATAAGATTCTGATTACTCCCACCCTC 705685
Query 7722 CTTA 7725
|||
Sbjct 705684 TTTA 705681
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||| |||||||||| ||||||||||||||||| |||||||| ||||| || |
Sbjct 706165 TTCAGGGTGATCAAAAAATCAAAATAAATGTTGATAAAGAATAGGATCTCCTCCTCCAGC 706224
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
|| |||||||| ||||| ||||||| || |||||||
Sbjct 706225 GGGGTCAAAAAATGATGTATTTAAATTTCGGTCTGTTAAAA 706265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192470266127672
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