Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq428 93.3 3e-14 seq218 91.5 1e-13 seq44 84.2 2e-11 >seq428 Length=160056 Score = 93.3 bits (102), Expect = 3e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || | ||||||||| |||| ||||| || ||||| ||||| || |||||||| | | Sbjct 129670 CCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGAC 129611 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || || | ||||||||| || Sbjct 129610 AAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGA 129551 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | |||||||| || |||||| ||||||| Sbjct 129550 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACAT 129517 >seq218 Length=661058 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| | |||| || | ||| ||||||||||||||||| ||||||| Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGG-- 356511 Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 | || | || |||||||| |||||| || ||| | || | ||| || || ||| | Sbjct 356512 AGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTG 356571 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACAT 101165 | | |||||||||||| ||||||| ||| |||| Sbjct 356572 GAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACAT 356607 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 101048 TCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATAT 101107 ||||| ||||| |||||||| | || |||| | ||||||||||||||| || ||| | Sbjct 352190 TCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAA 352249 Query 101108 ATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCG 101167 || | | ||| |||||| || | ||||||||||| || || ||||| | Sbjct 352250 ATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTT 352309 Query 101168 GCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAA 101225 | | || |||| | ||| | ||| | || || ||||| || || || ||||||| Sbjct 352310 TCAATTGTGTCTGATG--GTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAA 352367 Query 101226 TAAAAATTTGCAT 101238 |||||||||||| Sbjct 352368 CAAAAATTTGCAT 352380 >seq44 Length=1668621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 103375 ACGTTGCCCAAATCGCCAACGTGTCTGACGAGCGCGTCGGGCGCGCCGTGCGTTTCGCCG 103434 ||||| || | ||||||||||||||| ||| || || || || || || || | Sbjct 466048 ACGTTTCCAAGATCGCCAACGTGTCTCACGTCTGCATCAGGAGCTCCATGATCTTTGTTA 465989 Query 103435 GTGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTGCTTGTGTCGCCAAACTCGTGC 103494 ||||| ||||| | ||||| || | ||||||||| | |||| ||||| |||||| Sbjct 465988 TGCGGATTGAAATGAGCACCGGCTGAAATACAGCCGTTGGTGTTGTCACCAAATTCGTGC 465929 Query 103495 ACGTGAAAACCGTGCAATCCTTTGGGCAA 103523 || ||||| ||||| | |||||| | ||| Sbjct 465928 ACATGAAATCCGTGGAGTCCTTTCGTCAA 465900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409640888948892