Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq296 109 4e-19 >seq296 Length=775295 Score = 109 bits (120), Expect = 4e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||| | |||||| ||||| || | ||| |||| |||||||||||| | || | | || Sbjct 25618 AAATGACGCCACTGAAACCCATATATCGGACCCAAGTCTCCCTCTTCTCGGTCCCCAAAC 25559 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| | | |||||| | || || |||| |||| | ||||| || |||| | |||| | Sbjct 25558 CCCATTCTATCCAAATACTCCCTCGAACTGTTGACATCCCATATTTTTA--CGTTTCTGG 25501 Query 30137 --GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 || || ||||||| |||||| ||| | | |||||||||| |||||| || ||| Sbjct 25500 TAGAAAGTTCTTTGGCATTTGTGCTTCCTTTTATTAACCACAGCATCTCCTCGACTACGC 25441 Query 30195 CCTTCCAAAAGAC 30207 | ||||||||| Sbjct 25440 CACGCCAAAAGAC 25428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406143458945368