Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq296 109 4e-19
>seq296
Length=775295
Score = 109 bits (120), Expect = 4e-19
Identities = 141/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
||||| | |||||| ||||| || | ||| |||| |||||||||||| | || | | ||
Sbjct 25618 AAATGACGCCACTGAAACCCATATATCGGACCCAAGTCTCCCTCTTCTCGGTCCCCAAAC 25559
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| | | |||||| | || || |||| |||| | ||||| || |||| | |||| |
Sbjct 25558 CCCATTCTATCCAAATACTCCCTCGAACTGTTGACATCCCATATTTTTA--CGTTTCTGG 25501
Query 30137 --GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194
|| || ||||||| |||||| ||| | | |||||||||| |||||| || |||
Sbjct 25500 TAGAAAGTTCTTTGGCATTTGTGCTTCCTTTTATTAACCACAGCATCTCCTCGACTACGC 25441
Query 30195 CCTTCCAAAAGAC 30207
| |||||||||
Sbjct 25440 CACGCCAAAAGAC 25428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406143458945368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |