Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq12 401 5e-107 >seq12 Length=2314596 Score = 401 bits (444), Expect = 5e-107 Identities = 627/892 (70%), Gaps = 10/892 (1%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 || |||| ||||| ||||| |||| |||||| |||||||| || ||||| || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 ||||| || | |||||| ||||||||||| | | || ||| || ||||| | Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 4368 GCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATT 4427 |||| | | ||||||||||||||||| |||||||| ||| |||| ||| || || Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 4428 CCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCT 4487 ||||||| || ||||| | || | || ||||| || ||||| || | || || || Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 4488 GTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAA 4547 ||||||||| ||| | ||||| |||||||| | || | || ||||| |||| Sbjct 281856 CGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAAA 281797 Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||||||||||||||||||||| || | ||| || || |||||||| || | | Sbjct 281796 CAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGT 281737 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | ||| | || || |||||||| ||||| ||||| || |||||||| Sbjct 281736 CCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAA 281677 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CT- 4724 || ||||| || || ||||| || || | ||| ||| | | || || | || Sbjct 281676 ATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATG---TTGCATTCTTACTG 281620 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 | ||||| | | ||||| | ||| || |||||||| || || || || | ||||| Sbjct 281619 CTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCA 281560 Query 4785 TT--AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 || ||| || || ||| || |||||| ||||||||||| || || |||| Sbjct 281559 TTGAAAAGAAATT--CTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTAT 281502 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 ||||||| ||||| |||||||| || ||||| || || || |||||||| | ||| || | Sbjct 281501 ACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAG 281442 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 ||||||| ||||| | || ||||| ||||| | |||||| ||||| || || ||| | Sbjct 281441 TTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATG 281382 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCC 5022 | |||||||| || | ||||| || || || | | ||| ||| | || | || Sbjct 281381 CAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCC 281322 Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082 |||||| | || |||| | || |||||||| ||||| || || ||||| |||| Sbjct 281321 AGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTT 281262 Query 5083 TTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||||| | |||||| || ||||| ||||| |||| ||| || || || Sbjct 281261 CCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCT 281210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427028843788004