Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq296 138 8e-28
>seq296
Length=775295
Score = 138 bits (152), Expect = 8e-28
Identities = 399/605 (66%), Gaps = 12/605 (2%)
Strand=Plus/Minus
Query 27103 GTGGGAAAGGGTCTGGGCTCCCTCTCGA-GCTGAGTCTT-CAGCGGTTCCACGTGATCCA 27160
|||||||| | | || |||| |||| |||| ||||| || | ||| | |||||
Sbjct 26026 GTGGGAAATGTCTTTGGAACCCT-TCGAAGCTG-GTCTTTCAAAGCTTCTATGTGATTTT 25969
Query 27161 GGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGT 27220
| | | |||| ||| || | ||||| | ||| || | |||| || ||||| || |
Sbjct 25968 GAAATATGTGACTGTCGCCAATCGTGTGTATAAATTCGCTGGGTTTTAAACCGGTCACAT 25909
Query 27221 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCA 27280
|||| |||||| ||| ||||||| ||| || || ||||| || |||||||| || ||||
Sbjct 25908 GAGCTATCATGACCGTTAGGAGAGCGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCA 25849
Query 27281 TGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGAC 27340
| || |||| || ||||| | | | || | || ||| ||||| |||| ||
Sbjct 25848 TATCGGCCGATCTTTGGTATAACAACGAAGACAATTCGTCATTATTTACGAAAAATTGTA 25789
Query 27341 ATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACA 27400
| || || || ||||||||||| | | ||| || ||||| | || |
Sbjct 25788 CGAGACAATGACAGGGTGGAAGAGCCATTTGTGGTATGTCCACAGGATTCCACGAACATA 25729
Query 27401 CGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGAT 27460
||| || | || || | || | || |||| | | | | || ||||
Sbjct 25728 AGATTATCCTTCTATCATTCGGATAATTTTTGATTGTATTAATCACTTGACTCAATTGAT 25669
Query 27461 CCACCCC--CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCT 27518
| | || ||| | || || | | | |||| | | ||||| ||||| ||||| |
Sbjct 25668 CGATTCCTTCATTCGCG--TAATTGGCTCGCATGCCTCTATACTCAGCTCCAAAATGACG 25611
Query 27519 CCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTT 27578
||| || ||||| || | ||| |||| |||||||||||| | || | | || ||| | |
Sbjct 25610 CCACTGAAACCCATATATCGGACCCAAGTCTCCCTCTTCTCGGTCCCCAAACCCCATTCT 25551
Query 27579 GTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG--GAGAGC 27636
|||||| | || || |||| |||| | ||||| || |||| | |||| | || ||
Sbjct 25550 ATCCAAATACTCCCTCGAACTGTTGACATCCCATATTTTTA--CGTTTCTGGTAGAAAGT 25493
Query 27637 TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAA 27696
||||||| |||||| ||| | | |||||||||| |||||| || ||| | ||||
Sbjct 25492 TCTTTGGCATTTGTGCTTCCTTTTATTAACCACAGCATCTCCTCGACTACGCCACGCCAA 25433
Query 27697 AAGAC 27701
|||||
Sbjct 25432 AAGAC 25428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369489240564428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |