Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq310 571 8e-158 seq12 369 5e-97 seq104 93.3 6e-14 >seq310 Length=366558 Score = 571 bits (632), Expect = 8e-158 Identities = 1248/1855 (67%), Gaps = 27/1855 (1%) Strand=Plus/Plus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || |||||||| | || ||| |||||||||||||| | ||| ||||||| || ||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 76863 TGCATGCTTGTCAGT--TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGAC 76920 || ||| | || | ||| ||| | || | | ||||||||||| | ||||| | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 76921 TTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTT 76980 | || || || || ||||| | ||| |||||||| |||| ||| || || | ||||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716 Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGG 77037 |||| | |||||| | | | ||| |||||||| |||| || |||||||||| | Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776 Query 77038 AACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCT--CTCTGT 77095 | |||| || | | || || || || | |||| ||||| | ||| ||| || Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGT--CCTAACTCAGT 100834 Query 77096 TAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGT 77155 ||| ||||||| | |||| | || || | |||||||||||| || || | | || Sbjct 100835 CAAATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGT 100894 Query 77156 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGA 77215 || | ||| || |||||||| ||||||||||| || ||||||||||| || || || Sbjct 100895 ATATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGA 100954 Query 77216 AGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 77275 ||| || ||||| || || | | ||| |||||| | ||| | | ||||| | Sbjct 100955 AGCGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGC 101014 Query 77276 TTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAG 77335 ||| | | ||||||||| | |||| || || ||| | ||| || |||| Sbjct 101015 TTTCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAA 101074 Query 77336 AATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAG 77395 ||| || || || || || | ||| || |||||| || ||| | || || | Sbjct 101075 AATCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGAT 101134 Query 77396 TTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 77455 |||||| || ||||| | ||| |||||||| | ||||||||||| | | ||| || | Sbjct 101135 TTCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTT 101194 Query 77456 TTGTGCTTCAATACTATCAAACGG-ATA--ATGTAAAAGAATAAAGGCATCTGCTAATCC 77512 |||||| || ||| | | ||| | |||||| |||| ||||| ||||| || Sbjct 101195 CGCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAAA---TAAAAGCATCGGCTAAACC 101251 Query 77513 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGG 77572 || || || || ||||| ||||| || ||| ||| || |||| || ||||| | || Sbjct 101252 TTGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGG 101311 Query 77573 ATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTT 77632 ||||||||||| ||| |||||||| || || ||| | ||| ||||| | || || Sbjct 101312 ATAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTT 101371 Query 77633 TAGTTTAAGAAAATC---AAATCTTCCATC---TATAACAAACATGTTCAAAGCTATAGA 77686 || || |||||| || ||| ||| | |||||||| |||| || | || Sbjct 101372 TAACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGA 101431 Query 77687 TGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAG 77746 ||| | |||||| || || || || | || | | ||||| | || || || |||| Sbjct 101432 TGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAA 101491 Query 77747 ATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTT 77806 ||| || | | | || || || | |||||||| ||||| ||| | ||||||| || || Sbjct 101492 ATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTT 101551 Query 77807 ATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC 77866 ||| || || || |||||||| ||||| | || || | || |||| | ||| | Sbjct 101552 ATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACA-ATT 101610 Query 77867 TCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTT 77925 ||| ||| || ||| ||||| | ||| |||||| | ||| | | ||| Sbjct 101611 TCTGAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTT 101670 Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985 |||| | ||||||||| ||| | | ||| || |||| || || ||||||| ||||| Sbjct 101671 CAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACC 101730 Query 77986 AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045 ||| |||| || | ||||| ||||||||| | ||| ||||||||||| ||| ||| | Sbjct 101731 AGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACA 101790 Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105 ||||| | ||| ||||| ||||||||||| ||||| | || | ||| || | | Sbjct 101791 AATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATA 101850 Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165 | || | |||||||||||| ||||| || || | | | ||||||| || |||||||| | Sbjct 101851 TGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTT 101910 Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATG 78225 |||||| ||||||||| |||||| |||| | | ||| |||| | |||||| || | Sbjct 101911 GATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAG 101970 Query 78226 TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA 78285 | || || || || | || |||| || | || || ||||| | | ||| || | Sbjct 101971 TGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCA 102030 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 || |||||| ||||| || ||||| | |||| | | || || || | Sbjct 102031 AACCACCTGCCGATTTAGAAATGAGAGCACTTGTAGTCAAACATTTACAAATGCCTTCAA 102090 Query 78346 TACTGTCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 | || ||||| || || || ||| ||||| || | ||| | || || Sbjct 102091 TGCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAAGCTGAGGTCTTGTGGTCCCA 102149 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 || || | || ||| |||||| || || || || || | || |||||| ||| Sbjct 102150 GCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGTT 102209 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || || || | ||||| || | ||||| || || || || ||||| | ||| || Sbjct 102210 TCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTGT 102269 Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584 ||||||||||| || | || || | |||||| | || || ||| ||||||||| Sbjct 102270 TGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTTA 102329 Query 78585 AAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639 ||||||||||| ||||| ||||| || | || || | ||||| ||||| |||| Sbjct 102330 AAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 78742 CACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAA 78801 |||| || |||| || |||||||| || || ||||| | ||| || | ||| |||| | Sbjct 102761 CACTGAACTGTTTCTTCGTTTCCTTATGGAGGTTAGACATAGCAATACGTGCTGCTAATA 102820 Query 78802 TAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTA 78861 | |||||||||||||| | ||||| || ||||| ||||||| |||| |||| | Sbjct 102821 TCGCATAATCAGGATGGTTAGTAGTCATTGTTGCTGCAGTTTCTGCAGCTAGGGTATCCA 102880 Query 78862 ACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 | || | ||| || || ||| ||||| || |||||||| Sbjct 102881 ATTCAACAGTAGTAACTCCAGGATATAAGCCACTTATAACTTT 102923 >seq12 Length=2314596 Score = 369 bits (408), Expect = 5e-97 Identities = 635/917 (69%), Gaps = 9/917 (1%) Strand=Plus/Minus Query 47841 ACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 47900 ||||| || |||||||||||||| || || || || ||||| || ||||| || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 47901 GATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960 || || || | |||||| ||||| ||||| |||||||||| || | | | || || Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 47961 TCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATT 48020 ||| | || | || || || ||||| ||||| ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 48021 CCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCC 48080 || || || | || || | ||| || || | ||| || ||||| || | || ||||| Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 48081 ACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATAC--AACAA-ATGTTTAAACATT 48137 ||||| |||||| | ||| ||| ||| | ||||| || ||||||| Sbjct 281856 CGAATTATATCTGTTAC---TCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATT 281800 Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| |||||||||||||| | ||||||||| | | ||| | || ||||||||||| Sbjct 281799 AAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTC 281740 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 || || ||||| || || ||||| ||||||||||| || || || ||| ||| |||||| Sbjct 281739 AGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAG 281680 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC-TTCGT--TG 48314 || || ||||| || || |||||||| || || ||| | | | || ||| | || Sbjct 281679 AAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTG 281620 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374 ||||| | | |||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 281619 CTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCA 281560 Query 48375 TTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434 || || ||||| | ||| || | || | ||||| || || | | ||||||| Sbjct 281559 TTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATAC 281500 Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494 ||||| || || ||||||||||| || || || || || ||||| || | || || || Sbjct 281499 ATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTT 281440 Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 | ||||| || || |||| || | | || |||||||| ||||||||| ||| Sbjct 281439 ACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCA 281380 Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAG 48614 |||||||| || | ||||||| ||| |||| |||| | | || |||| |||| Sbjct 281379 GCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAG 281320 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 | | || || || | ||||||||||| | |||||| || || || || |||| Sbjct 281319 TGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCC 281260 Query 48675 TTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTT 48734 || ||| | | ||| || || ||||| || || || || || || || |||||||| Sbjct 281259 TTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTT 281200 Query 48735 TTTGCAAGGATAGGTTC 48751 | | ||| | ||||| Sbjct 281199 TCTCTAAGCAATGGTTC 281183 >seq104 Length=1066031 Score = 93.3 bits (102), Expect = 6e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 42683 GTATCGGTAAAGTAATTTCCTGTCCAATTTGATGTGCCTATATACGCCGTTTTATCGGTT 42742 || || |||||||| | | | | ||||||||| ||||||| ||| ||||| ||||||||| Sbjct 975 GTGTCTGTAAAGTAGTCTGCCGACCAATTTGAAGTGCCTACATAAGCCGTATTATCGGTT 1034 Query 42743 ACCATATATTTTGCGTGATTTACTCGGGAATACGGAATT 42781 ||||||||||| |||||| |||| | |||||| ||| Sbjct 1035 ACCATATATTTATTGTGATTCACTCTAGCATACGGTATT 1073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694634170760320