Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq310 571 8e-158
seq12 369 5e-97
seq104 93.3 6e-14
>seq310
Length=366558
Score = 571 bits (632), Expect = 8e-158
Identities = 1248/1855 (67%), Gaps = 27/1855 (1%)
Strand=Plus/Plus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| |||||||| | || ||| |||||||||||||| | ||| ||||||| || |||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 76863 TGCATGCTTGTCAGT--TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGAC 76920
|| ||| | || | ||| ||| | || | | ||||||||||| | ||||| |
Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656
Query 76921 TTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTT 76980
| || || || || ||||| | ||| |||||||| |||| ||| || || | |||||
Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716
Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGG 77037
|||| | |||||| | | | ||| |||||||| |||| || |||||||||| |
Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776
Query 77038 AACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCT--CTCTGT 77095
| |||| || | | || || || || | |||| ||||| | ||| ||| ||
Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGT--CCTAACTCAGT 100834
Query 77096 TAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGT 77155
||| ||||||| | |||| | || || | |||||||||||| || || | | ||
Sbjct 100835 CAAATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGT 100894
Query 77156 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGA 77215
|| | ||| || |||||||| ||||||||||| || ||||||||||| || || ||
Sbjct 100895 ATATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGA 100954
Query 77216 AGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 77275
||| || ||||| || || | | ||| |||||| | ||| | | ||||| |
Sbjct 100955 AGCGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGC 101014
Query 77276 TTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAG 77335
||| | | ||||||||| | |||| || || ||| | ||| || ||||
Sbjct 101015 TTTCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAA 101074
Query 77336 AATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAG 77395
||| || || || || || | ||| || |||||| || ||| | || || |
Sbjct 101075 AATCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGAT 101134
Query 77396 TTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 77455
|||||| || ||||| | ||| |||||||| | ||||||||||| | | ||| || |
Sbjct 101135 TTCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTT 101194
Query 77456 TTGTGCTTCAATACTATCAAACGG-ATA--ATGTAAAAGAATAAAGGCATCTGCTAATCC 77512
|||||| || ||| | | ||| | |||||| |||| ||||| ||||| ||
Sbjct 101195 CGCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAAA---TAAAAGCATCGGCTAAACC 101251
Query 77513 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGG 77572
|| || || || ||||| ||||| || ||| ||| || |||| || ||||| | ||
Sbjct 101252 TTGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGG 101311
Query 77573 ATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTT 77632
||||||||||| ||| |||||||| || || ||| | ||| ||||| | || ||
Sbjct 101312 ATAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTT 101371
Query 77633 TAGTTTAAGAAAATC---AAATCTTCCATC---TATAACAAACATGTTCAAAGCTATAGA 77686
|| || |||||| || ||| ||| | |||||||| |||| || | ||
Sbjct 101372 TAACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGA 101431
Query 77687 TGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAG 77746
||| | |||||| || || || || | || | | ||||| | || || || ||||
Sbjct 101432 TGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAA 101491
Query 77747 ATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTT 77806
||| || | | | || || || | |||||||| ||||| ||| | ||||||| || ||
Sbjct 101492 ATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTT 101551
Query 77807 ATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC 77866
||| || || || |||||||| ||||| | || || | || |||| | ||| |
Sbjct 101552 ATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACA-ATT 101610
Query 77867 TCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTT 77925
||| ||| || ||| ||||| | ||| |||||| | ||| | | |||
Sbjct 101611 TCTGAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTT 101670
Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985
|||| | ||||||||| ||| | | ||| || |||| || || ||||||| |||||
Sbjct 101671 CAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACC 101730
Query 77986 AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045
||| |||| || | ||||| ||||||||| | ||| ||||||||||| ||| ||| |
Sbjct 101731 AGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACA 101790
Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105
||||| | ||| ||||| ||||||||||| ||||| | || | ||| || | |
Sbjct 101791 AATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATA 101850
Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165
| || | |||||||||||| ||||| || || | | | ||||||| || |||||||| |
Sbjct 101851 TGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTT 101910
Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATG 78225
|||||| ||||||||| |||||| |||| | | ||| |||| | |||||| || |
Sbjct 101911 GATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAG 101970
Query 78226 TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA 78285
| || || || || | || |||| || | || || ||||| | | ||| || |
Sbjct 101971 TGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCA 102030
Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345
|| |||||| ||||| || ||||| | |||| | | || || || |
Sbjct 102031 AACCACCTGCCGATTTAGAAATGAGAGCACTTGTAGTCAAACATTTACAAATGCCTTCAA 102090
Query 78346 TACTGTCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
| || ||||| || || || ||| ||||| || | ||| | || ||
Sbjct 102091 TGCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAAGCTGAGGTCTTGTGGTCCCA 102149
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
|| || | || ||| |||||| || || || || || | || |||||| |||
Sbjct 102150 GCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGTT 102209
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|| || || | ||||| || | ||||| || || || || ||||| | ||| ||
Sbjct 102210 TCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTGT 102269
Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584
||||||||||| || | || || | |||||| | || || ||| |||||||||
Sbjct 102270 TGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTTA 102329
Query 78585 AAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639
||||||||||| ||||| ||||| || | || || | ||||| ||||| ||||
Sbjct 102330 AAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384
Score = 87.8 bits (96), Expect = 2e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 78742 CACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAA 78801
|||| || |||| || |||||||| || || ||||| | ||| || | ||| |||| |
Sbjct 102761 CACTGAACTGTTTCTTCGTTTCCTTATGGAGGTTAGACATAGCAATACGTGCTGCTAATA 102820
Query 78802 TAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTA 78861
| |||||||||||||| | ||||| || ||||| ||||||| |||| |||| |
Sbjct 102821 TCGCATAATCAGGATGGTTAGTAGTCATTGTTGCTGCAGTTTCTGCAGCTAGGGTATCCA 102880
Query 78862 ACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904
| || | ||| || || ||| ||||| || ||||||||
Sbjct 102881 ATTCAACAGTAGTAACTCCAGGATATAAGCCACTTATAACTTT 102923
>seq12
Length=2314596
Score = 369 bits (408), Expect = 5e-97
Identities = 635/917 (69%), Gaps = 9/917 (1%)
Strand=Plus/Minus
Query 47841 ACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 47900
||||| || |||||||||||||| || || || || ||||| || ||||| ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 47901 GATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAAT 47960
|| || || | |||||| ||||| ||||| |||||||||| || | | | || ||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 47961 TCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATT 48020
||| | || | || || || ||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 48021 CCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCC 48080
|| || || | || || | ||| || || | ||| || ||||| || | || |||||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 48081 ACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATAC--AACAA-ATGTTTAAACATT 48137
||||| |||||| | ||| ||| ||| | ||||| || |||||||
Sbjct 281856 CGAATTATATCTGTTAC---TCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATT 281800
Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197
||||| |||||||||||||| | ||||||||| | | ||| | || |||||||||||
Sbjct 281799 AAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTC 281740
Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257
|| || ||||| || || ||||| ||||||||||| || || || ||| ||| ||||||
Sbjct 281739 AGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAG 281680
Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC-TTCGT--TG 48314
|| || ||||| || || |||||||| || || ||| | | | || ||| | ||
Sbjct 281679 AAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTG 281620
Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374
||||| | | |||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 281619 CTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCA 281560
Query 48375 TTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434
|| || ||||| | ||| || | || | ||||| || || | | |||||||
Sbjct 281559 TTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATAC 281500
Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494
||||| || || ||||||||||| || || || || || ||||| || | || || ||
Sbjct 281499 ATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTT 281440
Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554
| ||||| || || |||| || | | || |||||||| ||||||||| |||
Sbjct 281439 ACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCA 281380
Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAG 48614
|||||||| || | ||||||| ||| |||| |||| | | || |||| ||||
Sbjct 281379 GCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAG 281320
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
| | || || || | ||||||||||| | |||||| || || || || ||||
Sbjct 281319 TGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCC 281260
Query 48675 TTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTT 48734
|| ||| | | ||| || || ||||| || || || || || || || ||||||||
Sbjct 281259 TTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTT 281200
Query 48735 TTTGCAAGGATAGGTTC 48751
| | ||| | |||||
Sbjct 281199 TCTCTAAGCAATGGTTC 281183
>seq104
Length=1066031
Score = 93.3 bits (102), Expect = 6e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 42683 GTATCGGTAAAGTAATTTCCTGTCCAATTTGATGTGCCTATATACGCCGTTTTATCGGTT 42742
|| || |||||||| | | | | ||||||||| ||||||| ||| ||||| |||||||||
Sbjct 975 GTGTCTGTAAAGTAGTCTGCCGACCAATTTGAAGTGCCTACATAAGCCGTATTATCGGTT 1034
Query 42743 ACCATATATTTTGCGTGATTTACTCGGGAATACGGAATT 42781
||||||||||| |||||| |||| | |||||| |||
Sbjct 1035 ACCATATATTTATTGTGATTCACTCTAGCATACGGTATT 1073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694634170760320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |