Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq310 603 1e-167 seq12 446 2e-120 >seq310 Length=366558 Score = 603 bits (668), Expect = 1e-167 Identities = 1255/1854 (68%), Gaps = 25/1854 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || |||||||| | || ||| |||||||||||||| | ||| ||||||| || ||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 75458 TGCATGCTTGTTAGT--TTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGAC 75515 || ||| | | | ||| ||| | || | | ||||||||||| | ||||| | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 75516 TTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTT 75575 | || || || || ||||| | ||| |||||||| |||| ||| || || | ||||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716 Query 75576 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGG 75632 |||| | |||||| | | | ||| |||||||| |||| || |||||||||| | Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTA 75692 | || | || | | || || || ||| | |||| ||||| | | ||| || | Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836 Query 75693 AAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGT 75752 || ||||||| | |||| | || |||| |||||||||||| || || | || || | Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896 Query 75753 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAG 75812 | | ||| || |||||||| ||||||||||| || ||||||||||| || ||||||| Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956 Query 75813 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 75872 | || ||||| || || | | ||| |||||| | ||| | | ||||| ||| Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016 Query 75873 TTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | | | ||||||||| | |||| || || ||| | ||| || |||| || Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076 Query 75933 TTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTT 75992 | || ||||| || || | ||| || |||| || || || || || | || Sbjct 101077 TCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATTT 101136 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 | || || || || | ||||||||||| | ||||||||||| | | |||||| | | Sbjct 101137 CACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTT-TC 101195 Query 76053 GC-GCTTCAAGACTATCAAAAGG-ATA--ATGTAAAAGAATAAATGCATCTGCTAGTCCC 76108 || |||||| | || ||| ||| ||| | |||||| |||| ||||| |||| || Sbjct 101196 GCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAAA---TAAAAGCATCGGCTAAACCT 101252 Query 76109 TGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGG 76168 || || || || ||||| ||||| || ||| ||| || ||| || ||||| | || Sbjct 101253 TGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGA 101312 Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228 |||||||||| || |||||||| || || ||| | ||| ||||| | || ||| Sbjct 101313 TAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTT 101372 Query 76229 AGTTTGAGAAAATCAAA---TTTTCCATCTATC---ACAAACATATTAAGAGCTATAGAT 76282 | || |||||| | ||||| ||| | ||||||||||| | || | ||| Sbjct 101373 AACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGAT 101432 Query 76283 GCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGA 76342 || | |||||| || || || || | || | ||||| | || || ||||||| | Sbjct 101433 GCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAA 101492 Query 76343 TTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTA 76402 || || | | || ||||| | |||||||| ||||| ||| |||| |||| || ||| Sbjct 101493 TTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTA 101552 Query 76403 TAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 76462 || || | || ||||| |||||||| | || || | || |||| | ||| | | Sbjct 101553 TATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATT-T 101611 Query 76463 CT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTC 76521 || ||| || | ||| ||||| ||| |||||| | | ||| ||| |||| Sbjct 101612 CTGAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTC 101671 Query 76522 AAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA 76581 ||| | ||||||||| ||| | | || ||||||| || |||||||||| |||||| Sbjct 101672 AAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCA 101731 Query 76582 CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 76641 | |||| || | ||| | ||||||||| | ||| ||||||||||| ||| ||| | Sbjct 101732 GTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAA 101791 Query 76642 ATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAAT 76701 ||||| | ||| ||||| ||||||||||| ||||| | || || || || | || Sbjct 101792 ATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATAT 101851 Query 76702 ATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTG 76761 || | |||||||||||| ||||| || || | | |||| |||| || |||||||| || Sbjct 101852 GTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTG 101911 Query 76762 ATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGT 76821 ||||| ||||||||| |||||| |||| | | ||| |||| | ||||| || || Sbjct 101912 ATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGT 101971 Query 76822 ACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTAT 76881 || || || || | || |||| || ||||| ||||| | || ||| | Sbjct 101972 GCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAA 102031 Query 76882 TCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTAT 76941 || |||||| |||||| || ||||||| |||| | | | ||||| || || Sbjct 102032 ACCACCTGCCGATTTAGAAATGAGAGCACTTGTAGTCAAACATTTACAAATGCCTTCAAT 102091 Query 76942 ACTATCATCCATCA-TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 77000 |||||||| || || || ||| ||||| || | ||| | || || | Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAAGCTGAGGTCTTGTGGTCCCAG 102150 Query 77001 CATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTT 77060 | |||| |||||| |||||| ||||| || || || | || |||||| |||| Sbjct 102151 CTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGTTT 102210 Query 77061 CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCT 77120 | || | || |||||||| | ||||| || ||||| || ||||| | ||| || | Sbjct 102211 CTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTGTT 102270 Query 77121 GAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 77180 |||||| ||| || | || || | |||||| | || || ||| |||||||||| Sbjct 102271 GAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTTAA 102330 Query 77181 AACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 |||||||||| ||||| ||||| || | || || | ||||| ||||| |||| Sbjct 102331 AACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 77346 GtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGT 77405 |||| || |||||||| || || || || | || || | || |||| || ||||| | Sbjct 102770 GTTTCTTCGTTTCCTTATGGAGGTTAGACATAGCAATACGTGCTGCTAATATCGCATAAT 102829 Query 77406 CAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAG 77465 ||||||| | ||||| || ||||| ||||||| |||| ||||| ||||| | || Sbjct 102830 CAGGATGGTTAGTAGTCATTGTTGCTGCAGTTTCTGCAGCTAGGGTATCCAATTCAACAG 102889 Query 77466 TAGTAACTCCGTTATAT-AGCC-CTTGAATAACTTT 77499 |||||||||| |||| |||| ||| |||||||| Sbjct 102890 TAGTAACTCCAGGATATAAGCCACTT--ATAACTTT 102923 >seq12 Length=2314596 Score = 446 bits (494), Expect = 2e-120 Identities = 653/916 (71%), Gaps = 7/916 (1%) Strand=Plus/Minus Query 46330 ACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 46389 ||||| || ||||| ||||||||||| || || || ||||| || ||||| || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 46390 GATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAAT 46449 || || || | |||||| ||||||||||| ||||||||||||| || | | | || || Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 46450 TCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATT 46509 ||| | || | || || || ||||| |||||| ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 46510 CCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC- 46568 || || || | || || | ||| || || | ||| || |||||||| | || ||||| Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 46569 CGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAA 46628 ||| ||||| ||||||| || | |||| || | | || ||||||||| Sbjct 281856 CGA-ATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAA 281798 Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| |||||||||||||| | |||||||| | | ||| | || ||||||||||| || Sbjct 281797 ACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAG 281738 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 || ||||| || || || || ||||||||||| ||||| || ||| ||| |||||||| Sbjct 281737 TCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAA 281678 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA-TGA- 46806 || ||||| ||||| || ||||| |||| || ||| | | | |||| ||| || Sbjct 281677 AATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGCT 281618 Query 46807 -ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| |||||||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct 281617 GATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATT 281558 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 || ||||| | ||| || || || | ||| || || || | | ||||||||| Sbjct 281557 GAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACAT 281498 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 ||||||||| || |||||||| || || || || || ||||| || | || ||||| | Sbjct 281497 TTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTAC 281438 Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAG 47044 ||||| ||| || |||| || |||| || ||||| || ||||||||| |||| Sbjct 281437 TTGTACTTCTTGACTGAATCTCTCT-ACAAGGTTTTCATTTACAATTCCATCAGATGCAG 281379 Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGT 47104 ||||||| || | ||||||| ||| |||| ||||||| | | || |||| ||||| Sbjct 281378 CAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGT 281319 Query 47105 CATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTT 47164 | || || || | ||||||||||| | ||||||||| || || || |||| | Sbjct 281318 GGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCT 281259 Query 47165 TATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 | ||| | | ||| || || ||||||| || ||||| || || || || ||||||||| Sbjct 281258 TGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTTT 281199 Query 47225 TTGCAAGTATAGGTTC 47240 | ||| | ||||| Sbjct 281198 CTCTAAGCAATGGTTC 281183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712898860220160