Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq428 170 4e-37
seq218 163 6e-35
seq25 138 2e-27
>seq428
Length=160056
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| || || ||| |||||||||||||| |||| | || |||||||| ||
Sbjct 129652 ACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCC 129593
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||| || | ||||||||||||| ||||| || || || ||||||
Sbjct 129592 AATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGG 129533
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| ||||| || || | ||||| || || || | |||||| || | |||||| ||||||
Sbjct 129532 ATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTA 129473
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| |||||||| |||||||| |||||
Sbjct 129472 CCCGTTAAAGTCTTCACGAATATTTGCAT 129444
>seq218
Length=661058
Score = 163 bits (180), Expect = 6e-35
Identities = 152/193 (79%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| || |||||||||| ||| ||||| ||||| |||| || ||||| |||||
Sbjct 356261 TTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAA 356320
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| | |||||||||||| |||||||| ||||||||||| || || ||||| ||| |
Sbjct 356321 AATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTT 356380
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || || || | || ||||| |||||||| ||||| || || | |||||| ||
Sbjct 356381 TTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTAC 356440
Query 283088 GAATATCTGCATT 283100
|| |||||||||
Sbjct 356441 AAAGATCTGCATT 356453
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | || || | |||| ||| | || || ||||| || |||||||| ||||
Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || | ||||| || | |||||| |||||||| ||||||||||| ||||| |||
Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| || ||||| |||||||| || || ||| | || || ||||| || | ||| |||
Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || || || || ||||| || || |||||
Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 138 bits (152), Expect = 2e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || | |||| ||| | || || ||||| || |||||||| ||||
Sbjct 357234 ACCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGA 357293
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | ||||| || | ||| || || ||||| ||||||||||||||||| ||
Sbjct 357294 CAATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGG 357353
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| || ||||| |||||||| || || || | || || ||||| || | ||| ||
Sbjct 357354 AATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTAC 357413
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||| || ||||| || ||||| || | ||||||||
Sbjct 357414 TTCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAAC 357449
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || | | ||||| |||||| || ||| || || || || || || |
Sbjct 355997 ACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 356056
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || ||||| || | |||||||||||||| || | ||||||||| || ||
Sbjct 356057 AAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGG 356116
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || ||||| ||| | || || || || || | || ||
Sbjct 356117 GATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTAC 356176
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || || ||||| || || || || ||||| || |||||
Sbjct 356177 TTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 132 bits (146), Expect = 1e-25
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
|||||| ||||||||||| |||| | || | ||||| || || || || || |||||
Sbjct 356717 TTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAA 356776
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| || | ||||||||| ||||||||||| || ||||| || || || |||||| |
Sbjct 356777 AATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTAGCCTTTACGTT 356836
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | ||| || || || ||||| || ||||| || | ||||||||
Sbjct 356837 CTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAAC 356896
Query 283088 GAATATCTGCATT 283100
|| |||||||||
Sbjct 356897 AAAAATCTGCATT 356909
Score = 104 bits (114), Expect = 5e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||||||||||||||| |||||||| || ||||| |||||||| || || || |
Sbjct 352022 ATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTT 352081
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | ||| ||||| || ||||| || || || || | ||||||||
Sbjct 352082 TCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAGTGTCTTAACA 352141
Query 283089 AATATCTGCATT 283100
|| |||||||||
Sbjct 352142 AAAATCTGCATT 352153
Score = 93.3 bits (102), Expect = 9e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033
|||||||||||| |||||||| || ||||| |||||||| || || ||| | || ||
Sbjct 357108 ACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAAT 357167
Query 283034 AGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093
||||| || | ||| ||||| || ||||| || || || || || || ||||| || ||
Sbjct 357168 TGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAAT 357227
Query 283094 CTGCAT 283099
|||||
Sbjct 357228 TTGCAT 357233
>seq25
Length=1883024
Score = 138 bits (152), Expect = 2e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || |||||| || ||||| ||||||| ||| || |||||||| |||
Sbjct 1512043 ACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCT 1512102
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || || || || | ||||| ||| |||||||| |||||||||||
Sbjct 1512103 AATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 1512162
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| || ||||| | ||||| ||||| || | ||| || || || ||||| || ||
Sbjct 1512163 ATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTT 1512222
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | ||| || || || || |||||
Sbjct 1512223 CCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046685715552152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |