Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq428 170 4e-37 seq218 163 6e-35 seq25 138 2e-27 >seq428 Length=160056 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || ||| |||||||||||||| |||| | || |||||||| || Sbjct 129652 ACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCC 129593 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||| || | ||||||||||||| ||||| || || || |||||| Sbjct 129592 AATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGG 129533 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || ||||| || || | ||||| || || || | |||||| || | |||||| |||||| Sbjct 129532 ATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTA 129473 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| |||||||| ||||| Sbjct 129472 CCCGTTAAAGTCTTCACGAATATTTGCAT 129444 >seq218 Length=661058 Score = 163 bits (180), Expect = 6e-35 Identities = 152/193 (79%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| || |||||||||| ||| ||||| ||||| |||| || ||||| ||||| Sbjct 356261 TTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAA 356320 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | |||||||||||| |||||||| ||||||||||| || || ||||| ||| | Sbjct 356321 AATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTT 356380 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || || || | || ||||| |||||||| ||||| || || | |||||| || Sbjct 356381 TTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTAC 356440 Query 283088 GAATATCTGCATT 283100 || ||||||||| Sbjct 356441 AAAGATCTGCATT 356453 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || | |||| ||| | || || ||||| || |||||||| |||| Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | ||||| || | |||||| |||||||| ||||||||||| ||||| ||| Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || ||||| |||||||| || || ||| | || || ||||| || | ||| ||| Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || || || ||||| || || ||||| Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Score = 138 bits (152), Expect = 2e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || | |||| ||| | || || ||||| || |||||||| |||| Sbjct 357234 ACCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGA 357293 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||||| || | ||| || || ||||| ||||||||||||||||| || Sbjct 357294 CAATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGG 357353 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || ||||| |||||||| || || || | || || ||||| || | ||| || Sbjct 357354 AATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTAC 357413 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| || ||||| || | |||||||| Sbjct 357414 TTCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAAC 357449 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | ||||| |||||| || ||| || || || || || || | Sbjct 355997 ACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 356056 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || ||||| || | |||||||||||||| || | ||||||||| || || Sbjct 356057 AAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGG 356116 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||||||||| || || ||||| ||| | || || || || || | || || Sbjct 356117 GATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTAC 356176 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || || ||||| || || || || ||||| || ||||| Sbjct 356177 TTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224 Score = 132 bits (146), Expect = 1e-25 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| ||||||||||| |||| | || | ||||| || || || || || ||||| Sbjct 356717 TTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAA 356776 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || || | ||||||||| ||||||||||| || ||||| || || || |||||| | Sbjct 356777 AATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTAGCCTTTACGTT 356836 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||| || || || ||||| || ||||| || | |||||||| Sbjct 356837 CTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAAC 356896 Query 283088 GAATATCTGCATT 283100 || ||||||||| Sbjct 356897 AAAAATCTGCATT 356909 Score = 104 bits (114), Expect = 5e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||||||||||||||| |||||||| || ||||| |||||||| || || || | Sbjct 352022 ATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTT 352081 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | ||| ||||| || ||||| || || || || | |||||||| Sbjct 352082 TCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAGTGTCTTAACA 352141 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 352142 AAAATCTGCATT 352153 Score = 93.3 bits (102), Expect = 9e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033 |||||||||||| |||||||| || ||||| |||||||| || || ||| | || || Sbjct 357108 ACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAAT 357167 Query 283034 AGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093 ||||| || | ||| ||||| || ||||| || || || || || || ||||| || || Sbjct 357168 TGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAAT 357227 Query 283094 CTGCAT 283099 ||||| Sbjct 357228 TTGCAT 357233 >seq25 Length=1883024 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || |||||| || ||||| ||||||| ||| || |||||||| ||| Sbjct 1512043 ACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCT 1512102 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || || || || | ||||| ||| |||||||| ||||||||||| Sbjct 1512103 AATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 1512162 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| || ||||| | ||||| ||||| || | ||| || || || ||||| || || Sbjct 1512163 ATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTT 1512222 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||| || || || || ||||| Sbjct 1512223 CCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046685715552152