Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq12 347 1e-90
>seq12
Length=2314596
Score = 347 bits (384), Expect = 1e-90
Identities = 613/891 (69%), Gaps = 8/891 (1%)
Strand=Plus/Minus
Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268
|| || || ||||||||||| || || |||| || ||||||||||| || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAAT 23328
|| || || | |||||| ||||| ||||| | |||||| | | ||| ||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 23329 TCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATA 23388
|| |||||| | || ||||||||||| ||||| ||| |||||| | | || |||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 23389 CCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCT 23448
|| ||||| |||| || | |||||| ||| ||| | |||||| ||| |||||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 23449 TTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAA----ATACTTAAACAA 23504
|||||| | | | ||| || | | ||| | ||| || ||| |||||
Sbjct 281856 CGAATTATAT---CTGTTACTCGCTCTTTTGATGGTT-TTTGAACAATATAAGAAAACAT 281801
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
|||||| |||||||||||||| | |||||||| | | ||| | ||||||||||||||
Sbjct 281800 TAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGT 281741
Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624
| ||||||||| | || ||||| || | |||||| || |||||||| ||| |||||
Sbjct 281740 CAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAA 281681
Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684
|||||| || || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct 281680 GAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACT 281621
Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744
||||| | | ||||| ||||||| || ||||| || |||||||| ||
Sbjct 281620 GCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGC 281561
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
|| || ||||| ||| ||||| || |||||| || ||||| || ||||||
Sbjct 281560 ATTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATA 281501
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
|||||| ||||| ||||||||||| ||||| || || |||||||| || | ||| ||||
Sbjct 281500 CATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGT 281441
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
| ||| || || | | ||||| | | | ||||| || ||||| |||||| ||
Sbjct 281440 TACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGC 281381
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCA 23984
|||||| || ||||| |||| | || ||||| ||||||||| |||| || || | |||
Sbjct 281380 AGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCA 281321
Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044
| || || || || | || ||||| || |||||| || || ||
Sbjct 281320 GTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTC 281261
Query 24045 CTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095
||| ||| || |||||| || || ||| || |||||||||||||| ||
Sbjct 281260 CTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCT 281210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521462003823200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |