Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq218 82.4 7e-11 >seq218 Length=661058 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || ||| || || ||||| ||||| ||||||||||| || | || || Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || || || || || || | | ||| || || | |||| || || |||| | || Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 356590 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCT--CGACTCCACCTCCACCGTTATCGTTT 41831 | ||||||||| ||| || | ||| || | || || || | || ||||||| Sbjct 356591 AATTTTTGCTTTAACATTCTCA-ATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTT 356649 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| |||||||| ||||| Sbjct 356650 TACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462280954145600