Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq218 82.4 7e-11
>seq218
Length=661058
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||| || ||| || || ||||| ||||| ||||||||||| || | || ||
Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|| || || || || || || | | ||| || || | |||| || || |||| | ||
Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 356590
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCT--CGACTCCACCTCCACCGTTATCGTTT 41831
| ||||||||| ||| || | ||| || | || || || | || |||||||
Sbjct 356591 AATTTTTGCTTTAACATTCTCA-ATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTT 356649
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || ||||| |||||||| |||||
Sbjct 356650 TACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462280954145600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |