Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq429159 107 2e-18 >seq429159 Length=5605 Score = 107 bits (118), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||| || || ||||| || ||||| || |||| ||||| ||||| |||||| Sbjct 3746 CCTGGCATAAGCCCTCGCTTCTTCAGCCAGAAAATGGCAGCAAAACTACCAGAGAAGAAA 3805 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT--- 24311 || || || || || |||||||| || | || || || || || || || Sbjct 3806 ATCCCCTCGACAGCGGCAAAGGCGATGATTCGCTCGCCGAAAGATGCAGACTCGTGACAG 3865 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||||| | ||||||||||||||||| || ||||| ||||| ||||| ||||| || Sbjct 3866 ATCCACTTGAGCGCCCAATCGGCCTTCTTCTTGACACATGGCATCGTCTCCATAGCGTTG 3925 Query 24372 AAGAGATA 24379 || ||||| Sbjct 3926 AACAGATA 3933 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 24605 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 24664 ||||||| ||||| || || | ||| |||||||| | ||||| || || ||||| || Sbjct 4416 CCAATCAGCCATATCCTTGGACAAATCAACTTCTTCAGCCGTCCAGAAGGAGGCCTCAGC 4475 Query 24665 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGG 24724 ||||||||||||| |||||||||||| || || || || |||| || || | ||| Sbjct 4476 TTTTTTATACATATGCCAGATGTCATGGTACTGGATGGGGAAAACTACGAAGCGTCGTGG 4535 Query 24725 ATTTT 24729 ||||| Sbjct 4536 ATTTT 4540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590511859393680