Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq298504 104 4e-17 >seq298504 Length=516 Score = 104 bits (114), Expect = 4e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| ||||||| || || ||||| || || || | ||| | || ||| Sbjct 49 ATGCAGATATTTGTAAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTAGAGGCATCC 108 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | ||| |||||| ||||| || ||||| || ||||| ||||| Sbjct 109 GACTCAATTGAGAATGTGAAAGCGAAAATCCAAGACAAGGAAGGAATTCCACCAGATCAG 168 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || || || ||||| || || || ||| | || || || || || || Sbjct 169 CAGCGACTCATCTTCGCGGGAAAGCAGTTGGAAGATGGCCGTACCTTGTCTGACTACAAC 228 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 || ||||||||||| || ||||| | || || Sbjct 229 ATCCAAAAAGAATCTACCCTGCATCTTGTGTT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751371900988800