Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06-
24] 432,491 sequences; 271,924,966 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq306801 104 5e-17
seq432080 87.8 4e-12
>seq306801
Length=540
Score = 104 bits (114), Expect = 5e-17
Identities = 132/180 (73%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| ||| | |||||| || | |||||||||||||| ||| | |||||| | |||||||
Sbjct 456 TGCCCGGCATTCAAGATCATCATCCTGGACGAGGCAGACTCGATGACGCATGCCGCGCAG 397
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321
|||| || || || |||||||||| | | || ||||| || ||||| ||||||
Sbjct 396 GCCGCTCTGCGTCGCACGATGGAGAAGGAGACCAAGTCCACGCGGTTCTGCCTCGTGTGC 337
Query 254322 AACTACGT--GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||| | || |||||| | || ||| | || || ||| | ||||| || ||||
Sbjct 336 AACTACGTCAGCCG--CATCATCCCGCCACTGACCTCGCGATGCTCTAAGTTCCGCTTCA 279
>seq432080
Length=12955
Score = 87.8 bits (96), Expect = 4e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 249275 CGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAA 249334
|||| || ||||| | || |||||||||||| || || |||||||| ||| | || |
Sbjct 11059 CGTTTGCTATGTACCTCGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCAAGA 11118
Query 249335 AGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCG 249394
|||| | ||| || ||| | | || |||||||| ||||||||||| ||| || | |
Sbjct 11119 AGAATACCGGTAAGGAGGAGGTCCGTGCCCGTGACCTTTTCTACGGCCTCTGGATCCCAG 11178
Query 249395 ACTTGTTCATG 249405
|| ||||||||
Sbjct 11179 ACCTGTTCATG 11189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1067816347978688
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |