Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq391541 127 1e-24 >seq391541 Length=1171 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| || | ||||| || || ||||| || || ||||| |||||||| || Sbjct 1085 CCACCTCGCAGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAA 1026 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | || || | |||||| |||||| | |||| ||| ||||| ||| || Sbjct 1025 AGAGTTCTGCCATCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGGG 966 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| |||||||| || ||| ||| ||| | || || | || | ||| || Sbjct 965 ATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGACC 906 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 |||| ||||||||| ||||| || || ||||| || ||||||||||| || Sbjct 905 TCTAGGGTAATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCATCTT 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360270159209031