Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq383329 105 3e-18 seq307889 105 3e-18 seq299208 105 3e-18 seq222887 104 1e-17 seq316663 102 4e-17 seq203989 100 1e-16 seq387466 96.9 2e-15 seq354315 96.9 2e-15 seq214372 96.9 2e-15 seq180872 95.1 6e-15 seq366755 89.7 3e-13 seq338902 89.7 3e-13 seq236776 89.7 3e-13 seq379417 87.8 9e-13 seq353570 87.8 9e-13 seq300830 87.8 9e-13 seq300102 87.8 9e-13 seq137656 87.8 9e-13 seq137655 87.8 9e-13 seq144279 84.2 1e-11 seq427680 82.4 4e-11 seq167194 82.4 4e-11 >seq383329 Length=1033 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||| Sbjct 398 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGGCGCTCTAACCAA 339 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 338 CTGAGCTAATGGGCC 324 >seq307889 Length=544 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 286 TGGCCCATGGGGGGGTCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 345 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 346 TGAGCTAATGGGCCG 360 >seq299208 Length=518 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||| Sbjct 157 TTGGCCCATGGGGGGATCGAACCCACAACCTTCGCGTTATTAGCACGACGCTCTAACCAA 216 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 217 CTGAGCTAATGGGCC 231 >seq222887 Length=366 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| || || Sbjct 5 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACGAA 64 Query 11515 CTGAGCTAATGGGC 11528 |||||||||||||| Sbjct 65 CTGAGCTAATGGGC 78 >seq316663 Length=573 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 315 TGGCCCATGGGGGGGTCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 374 Query 11516 TGAGCTAATGGGCCG 11530 |||||||||||||| Sbjct 375 CGAGCTAATGGGCCG 389 >seq203989 Length=342 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| |||||| |||||||||||||||||||||| |||| | Sbjct 49 TGGCCCATGGGGGGATCGAACCCACGACCTCCGCGTTATTAGCACGACGCTCTAACCAGC 108 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 109 TGAGCTAATGGGCC 122 >seq387466 Length=1098 Score = 96.9 bits (106), Expect = 2e-15 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 11470 ATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 ATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 60 >seq354315 Length=753 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 749 GGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGG 690 Query 11528 CC 11529 || Sbjct 689 CC 688 >seq214372 Length=355 Score = 96.9 bits (106), Expect = 2e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 355 GATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGC 296 Query 11529 CG 11530 || Sbjct 295 CG 294 >seq180872 Length=315 Score = 95.1 bits (104), Expect = 6e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 315 GATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGC 256 Query 11529 C 11529 | Sbjct 255 C 255 >seq366755 Length=849 Score = 89.7 bits (98), Expect = 3e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 AACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 56 >seq338902 Length=665 Score = 89.7 bits (98), Expect = 3e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 AACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 56 >seq236776 Length=387 Score = 89.7 bits (98), Expect = 3e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 11474 AACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 AACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 56 >seq379417 Length=981 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq353570 Length=748 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq300830 Length=522 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 521 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 472 >seq300102 Length=520 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 519 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 470 >seq137656 Length=275 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 4 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 53 >seq137655 Length=275 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 4 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 53 >seq144279 Length=281 Score = 84.2 bits (92), Expect = 1e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11426 GGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCT 11485 || ||| | |||| | || ||||| | ||||||||| |||||||||| |||||| Sbjct 195 GGCAAACAAAGAACTGATCAAAAAAGTA--TGGCCCATGGGGGGATCGAACCCACGACCT 252 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||||||||||||||| ||||| Sbjct 253 TCGCGTTATTAGCACGACGCTCTAACCAA 281 >seq427680 Length=4659 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||| ||||||||||| ||||||||| |||| || ||||||||||| Sbjct 318 GATCGAACCCACGACCTTTGCGTTATTAGCTCGACGCTCTAACCAGCTAAGCTAATGGGC 259 Query 11529 CG 11530 || Sbjct 258 CG 257 >seq167194 Length=302 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 59 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260112884052316