Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq298504 89.7 5e-13 seq340006 86.0 6e-12 seq37324 84.2 2e-11 >seq298504 Length=516 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 |||||| | |||| |||||||| ||||| | ||| || || || || | ||| Sbjct 261 CAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATC 202 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 |||| ||| ||||| | ||||| | || ||||||||||| ||||| ||||| ||||| Sbjct 201 TTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTGTC 142 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | ||||| || || || | | | ||| | || || |||| |||||||| Sbjct 141 TTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACCTCAAGGGTGATGGT 82 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || || || ||||| ||||||||| Sbjct 81 CTTGCCCGTCAGGGTCTTTACAAATATCTGCATG 48 >seq340006 Length=671 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 |||||||| | || |||||||| || | ||| || || || || || | |||| Sbjct 69 ACCAAGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGTCCG--TCCT 126 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| |||||| ||||||| |||| ||||||||||| || || ||||| ||||| | Sbjct 127 CAAGCTGCTTTCCGGCAAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTT 186 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || || || ||| | | | |||| || || |||| ||||| || | Sbjct 187 GGATCTTGGCTTTCACGTTCTCAATCGAATCAGAAGCTTCTACCTCAAGGGTGATTGTCT 246 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 | || || | || ||||| || ||||||||| || Sbjct 247 TCCCTGTCAATGTCTTCACGAAAATCTGCATGGTT 281 >seq37324 Length=216 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/132 (75%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | ||| | |||||||| | ||||||||||||||| | ||| || ||| Sbjct 130 CCTCCACGGAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCG--G 73 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | | ||| || ||| |||| ||| ||||| ||||||| |||| ||||| ||||| | Sbjct 72 ACAATGTACGACCATCTTCCAACTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGG 13 Query 94899 GAATACCTTCTT 94910 | |||||||||| Sbjct 12 GGATACCTTCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445867676132760