Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq429159 107 2e-18 >seq429159 Length=5605 Score = 107 bits (118), Expect = 2e-18 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33339 AATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 33398 ||| ||||| ||| || || | || ||||| || || ||||| || ||||| || || Sbjct 3721 AATCAGTTCATTGCTGAAAGTCAAGCCTGGCATAAGCCCTCGCTTCTTCAGCCAGAAAAT 3780 Query 33399 GGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC 33458 || ||| || ||||| ||||| || || || || || |||||||| || | || ||| Sbjct 3781 GGCAGCAAAACTACCAGAGAAGAAAATCCCCTCGACAGCGGCAAAGGCGATGATTCGCTC 3840 Query 33459 TCCATAACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC 33515 || || || || || |||||||| | ||||||||||||||||| || || Sbjct 3841 GCCGAAAGATGCAGACTCGTGACAGATCCACTTGAGCGCCCAATCGGCCTTCTTCTTGAC 3900 Query 33516 ACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||| |||||||| || || || || || ||||| Sbjct 3901 ACATGGCATCGTCTCCATAGCGTTGAACAGATA 3933 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||||||| ||||| || || | ||| |||||||| | ||||| || || ||||| || Sbjct 4416 CCAATCAGCCATATCCTTGGACAAATCAACTTCTTCAGCCGTCCAGAAGGAGGCCTCAGC 4475 Query 33834 CTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAA 33877 ||||||||||| | ||||||||||| || ||||| ||||||| Sbjct 4476 TTTTTTATACATATGCCAGATGTCATGGTACTGGATGGGGAAAA 4519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619579461781560