Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq429159 131 2e-25 seq422831 122 1e-22 >seq429159 Length=5605 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || || ||||| |||| ||||||||||| || || ||||| | || ||||| ||||| Sbjct 3710 TCATCACGTGAAATCAGTTCATTGCTGAAAGTCAAGCCTGGCATAAGCCCTCGCTTCTTC 3769 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 ||||| || || | ||||||||||||||| || || || || || || || ||||| || Sbjct 3770 AGCCAGAAAATGGCAGCAAAACTACCAGAGAAGAAAATCCCCTCGACAGCGGCAAAGGCG 3829 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 | || || ||| | ||| ||| || | | |||||| || | ||||||||||| Sbjct 3830 ATGATTCGCTCGCCGAAAGATGCAGACTCGTGACAGATCCACTTGAGCGCCCAATCGGCC 3889 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||| | ||| || | || || |||||||| || || || || Sbjct 3890 TTCTTCTTGACACATGGCATCGTCTCCATAGCGTTGAACAGATATTC 3936 >seq422831 Length=3098 Score = 122 bits (134), Expect = 1e-22 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGA 126320 || || |||||||||||||||||||||||||||||| ||||| |||||| ||||| ||| Sbjct 248 TAGAGCCAGGTTGGCCGAGTGGTCTAAGGCGCCAGACTTAAGTTCTGGTACCCTCTGGGT 189 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||| |||| Sbjct 188 GCGTGGGTTCGAACCCCACACCTGGCAAA 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553850333946840