Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq429159 125 1e-23 seq432080 113 8e-20 >seq429159 Length=5605 Score = 125 bits (138), Expect = 1e-23 Identities = 131/171 (77%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| || |||||||||||||| || ||||||||||||| || ||||||||||| Sbjct 3930 CTGTTCAACGCTATGGAGACGATGCCATGTGTCAAGAAGAAGGCCGATTGGGCGCTCAAG 3871 Query 42669 TGGATCGAGAGTCCCGA---CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 |||||| ||| ||| ||| | ||||||||| | | | |||||| |||| ||| Sbjct 3870 TGGATC---TGTCACGAGTCTGCATCTTTCGGCGAGCGAATCATCGCCTTTGCCGCTGTC 3814 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 ||||| || |||||||| || || || |||| |||||||| ||| || Sbjct 3813 GAGGGGATTTTCTTCTCTGGTAGTTTTGCTGCCATTTTCTGGCTGAAGAAG 3763 Score = 95.1 bits (104), Expect = 2e-14 Identities = 107/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||| ||||| ||||| || ||||| |||||||| | | || |||| Sbjct 4202 CTTGCCTTCTTCGCTGCCTCCGACGGGATCGTCAACGAGAACCTTGTCGAGAGATTCAGC 4143 Query 42483 AAAGAGGTGCA-GT-ACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 | ||||| || || || ||||| ||||||||||| ||||| ||| | ||||| || | Sbjct 4142 CAGGAGGTCCAAGTGACA--GAGGCCCGCTGCTTCTATGGCTTTCAGGTGGCCATGGAAA 4085 Query 42541 ACGTGCACTCTGAGGTGTAC 42560 | |||||||| || ||||| Sbjct 4084 ATGTGCACTCAGAAATGTAC 4065 >seq432080 Length=12955 Score = 113 bits (124), Expect = 8e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061 |||||||| |||||| ||||| |||||||||||| | | ||| ||||| | || | Sbjct 11198 GACCCTCTCCATGAACAGGTCTGGGATCCAGAGGCCGTAGAAAAGGTCACGGGCACGGAC 11139 Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121 ||| ||| || || |||||| | || || | || || |||| |||| ||||||| || Sbjct 11138 CTCCTCCTTACCGGTATTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGG 11079 Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 ||| | ||| | ||| | ||||| |||||||||||||| ||||| Sbjct 11078 CTCGAGGTACATAGCAAACGCGCCCGGCCGCTTGTTGCCGCCCTG 11034 Score = 91.5 bits (100), Expect = 3e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||||||||| || || ||||| || | ||| ||| || ||||||||||| ||| Sbjct 11909 GCCAGGTTGCACACAGCGACCTCTTCGGGTGAAGTGAACTCGATGATCTCGGTGCACAGG 11850 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 |||||||| ||| ||||| |||| ||| || ||||||||| |||||| || |||| Sbjct 11849 TTACTGCAGCGGATTGTGCCGAGGTTCTGCTGGTTGGACTTGCTGTTGCATGCATCCT 11792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 939233972438160