Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq432080 98.7 1e-15 >seq432080 Length=12955 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 115079 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAG 115138 |||||| ||||||| || | ||||||| | | ||| || |||||||||| ||||| | Sbjct 9812 CCTGCCGACTTTGAAATGAGGGCGCACTGCCTCAGAGTGTCGTAGATCCCTTCGATGCTG 9753 Query 115139 TCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTG 115198 || | | |||| | ||||||||||| || | ||||| | || || | ||| || Sbjct 9752 TCTTCGCTCATTGCCAGCAGGAAGCAGCTGGAGAGCTGTGGTCGCGGCGTTGCGGCGCTG 9693 Query 115199 AAGAGGGTTGGTGTCGCGTGGATGAACATA-CCTTGGGACATCTTATCGTAGGTCTCCAA 115257 || || || |||| |||||| |||| ||| | | || | | | ||| ||||| | Sbjct 9692 AACAGCGTGGGTGACGCGTGCGTGAA-ATATCGCTCCGATAGCAGGTTGTAAGTCTCAAT 9634 Query 115258 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 115310 | | || |||||| ||||| || ||||||| || || ||||| | ||||| Sbjct 9633 GGCAGCATCAATGTCCTCCCCATGGATACCGACTGACACACGCATCAGCATGT 9581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594124224302280