Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq298504 100 3e-16 seq396777 91.5 2e-13 seq345983 91.5 2e-13 seq3332 87.8 2e-12 seq404125 86.0 7e-12 seq400848 86.0 7e-12 seq345868 86.0 7e-12 seq319120 84.2 2e-11 seq192377 84.2 2e-11 seq93567 84.2 2e-11 seq415700 82.4 8e-11 seq367240 82.4 8e-11 seq293080 82.4 8e-11 seq116798 82.4 8e-11 seq96563 82.4 8e-11 >seq298504 Length=516 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||| | ||||| || || ||||| || ||||| |||| || || || | || Sbjct 261 CAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATC 202 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | |||||| || ||||| |||||||||||||| || | ||| | | |||||||| Sbjct 201 TTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTGTC 142 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 |||||| ||| | || | | | |||| | || || || | |||||||| Sbjct 141 TTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACCTCAAGGGTGATGGT 82 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||| || ||||||||||| || ||||| Sbjct 81 CTTGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq396777 Length=1289 Score = 91.5 bits (100), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 2 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGAT 61 >seq345983 Length=702 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 562 TCTCCCCGGCGGGGAATCGAACCCCAGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 503 Query 57066 ATACTACCGAGGATT 57080 || |||||||||||| Sbjct 502 ATGCTACCGAGGATT 488 >seq3332 Length=201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||| | ||||||||||||||||||||| ||||| | |||||||||| Sbjct 200 CGGCGGGGAATCGAACTCCGGTCTCCCGCGTGACAGGCGGGGATACTGATCACTATACTA 141 Query 57072 CCGAGGATTGAAT 57084 ||||||| ||||| Sbjct 140 CCGAGGACTGAAT 128 >seq404125 Length=1509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 57022 TCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1 TCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGA 57 >seq400848 Length=1404 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 57021 ATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATT 57080 ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| | Sbjct 700 ATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTACTGACCACTATACTACCGAGGACT 759 Query 57081 GA 57082 || Sbjct 760 GA 761 >seq345868 Length=702 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | | | |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 141 TCTCCCCGGCGGGGATTGGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 200 Query 57066 ATACTACCGAGGATT 57080 || |||||||||||| Sbjct 201 ATGCTACCGAGGATT 215 >seq319120 Length=582 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57023 CGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 57081 ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 1 CGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTG 59 >seq192377 Length=328 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57023 CGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 57081 ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 1 CGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTG 59 >seq93567 Length=245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGA 57082 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| Sbjct 1 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTGA 59 >seq415700 Length=2169 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57025 AACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGA 57082 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| Sbjct 2169 AACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTGA 2112 >seq367240 Length=853 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 57025 AACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1 AACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGAT 55 >seq293080 Length=501 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 57025 AACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1 AACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGAT 55 >seq116798 Length=260 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 57081 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 260 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTG 203 >seq96563 Length=247 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 57081 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 247 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGACTG 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540276116911440