Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq298504 116 4e-21 seq340006 102 8e-17 seq391541 86.0 6e-12 >seq298504 Length=516 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| ||||| | || ||||||||||| |||||||| || | | ||| || | ||||| Sbjct 258 CACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCTTC 199 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 | |||||| || || | ||||| |||||||| || || ||||||||||| || ||||| Sbjct 198 CAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTG 139 Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412 | |||| ||||| ||| ||| | || || || || || || | || | ||||| Sbjct 138 GA-TTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACCTCAAGGGTGATGGTCT 80 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| || ||||| || || ||||| Sbjct 79 TGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq340006 Length=671 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| || || |||||||| || | | || || |||| ||||||||||| ||| Sbjct 81 GTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGTCCGTCCTCAAGCTGCTTTCCG 140 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | |||||||| || || || |||||||| || ||||| | | || ||||| Sbjct 141 GCAAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGGA-TCTTGGCTTT 199 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | | |||| || || || || | || | ||||| || ||||| || Sbjct 200 CACGTTCTCAATCGAATCAGAAGCTTCTACCTCAAGGGTGATTGTCTTCCCTGTCAATGT 259 Query 64426 TTTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 260 CTTCACGAAAATCTGCAT 277 >seq391541 Length=1171 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || | | || | | || || || || || || Sbjct 1055 GTCGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCCAGTTGTTTTCCA 996 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||| || ||||| || ||||| ||||| ||||| || || ||| Sbjct 995 GCGAAGATCAGACGCTGTTGATCGGGGGGGATTCCCTCTTTGTCTTGGATCTTGGCCTTA 936 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | | ||| || || || |||| || | |||||| || || | ||| Sbjct 935 ACATTCTCGATCGAGTCAGAAGCTTCGACCTCTAGGGTAATGGTCTTACCCGTGAGGGTT 876 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||||||||| || Sbjct 875 TTAACGAAAATTTGCATCTT 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496943651510040