Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq160565 93.3 3e-14 seq236856 91.5 1e-13 seq379775 89.7 4e-13 seq232485 89.7 4e-13 seq379974 86.0 5e-12 seq365647 86.0 5e-12 seq223358 86.0 5e-12 seq70268 86.0 5e-12 seq229149 82.4 6e-11 >seq160565 Length=295 Score = 93.3 bits (102), Expect = 3e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 |||||||||| |||||||||||||||||||||||||| | ||||||||||| |||||| Sbjct 294 TCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCAGCCGAGC 235 Query 108947 TGGGGAACGAC 108957 |||| ||| || Sbjct 234 TGGGCAACTAC 224 >seq236856 Length=387 Score = 91.5 bits (100), Expect = 1e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||| | Sbjct 66 TGGCTTTCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCAG 7 Query 108941 CCGAG 108945 ||||| Sbjct 6 CCGAG 2 >seq379775 Length=985 Score = 89.7 bits (98), Expect = 4e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 108880 TTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCC 108939 || ||| |||||||||| |||||||||||||||||||||||||| | ||||||||| || Sbjct 297 TTCGCTATCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGACC 356 Query 108940 GCCGAGTTGGGGAACGACT 108958 ||||||| || | | ||| Sbjct 357 TCCGAGTTCGGCACCTACT 375 >seq232485 Length=380 Score = 89.7 bits (98), Expect = 4e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 108446 GACAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACA 108505 |||||||||||||| | ||||||| ||| ||| | || |||||||||| | || | Sbjct 145 GACAGAACACCATCTACGACTGGGTGCGCGACCACCGCGTCCACCACAAGTTCAGCGAGA 204 Query 108506 -CGACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTC 108564 |||| |||||||| |||||| ||||| | || |||| ||| | ||||| || ||||| Sbjct 205 CCGAC-GCCGACCCCCACAACTCCAACCGAGGCTTCTTCTTCGCCCACGTCGGCTGGCTG 263 Query 108565 ATGATGACCAAGGACCCCGACGT 108587 ||| || ||| |||| || || Sbjct 264 ATGCAGAAGAAGCACCCGGAAGT 286 >seq379974 Length=987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 |||||||||| |||||||||||||||||||||||||| | ||||||||| || |||||| Sbjct 682 TCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGACCTCCGAGT 623 Query 108947 TGGGGAACGACT 108958 | || | | ||| Sbjct 622 TCGGCACCTACT 611 >seq365647 Length=839 Score = 86.0 bits (94), Expect = 5e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 || || |||||||| |||||||||||||||||||||||||| | ||||||||| | ||| Sbjct 568 GCGCTGGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGACAGCC 509 Query 108943 GAGTTGGGGAACGAC 108957 ||| |||| ||| || Sbjct 508 GAGCTGGGCAACTAC 494 >seq223358 Length=367 Score = 86.0 bits (94), Expect = 5e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| |||||||||| |||||||||||||||||||||||||| | ||||||||||| | Sbjct 302 TGGCGTTCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCAG 361 Query 108941 CCGAG 108945 ||||| Sbjct 362 CCGAG 366 >seq70268 Length=233 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | |||||||| |||||||| ||||||||||||||||| | ||||||||||| | Sbjct 5 TGGCGATGGGCGAGGGCTGGCACAATTACCACCACGTGTTCCCGTGGGACTACAAGGCAG 64 Query 108941 CCGAGTTGGGGAACGAC 108957 ||||| |||| ||| || Sbjct 65 CCGAGCTGGGCAACTAC 81 >seq229149 Length=375 Score = 82.4 bits (90), Expect = 6e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108888 CGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTT 108947 ||||||||| |||||||||||||||||||||||||| | ||||||| | | |||||| | Sbjct 186 CGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAGGTCAGCCGAGCT 127 Query 108948 GGGGAACGAC 108957 ||| ||| || Sbjct 126 GGGCAACTAC 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379760481655704