Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq391541 102 8e-17 >seq391541 Length=1171 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||||||||| || || | | | ||||||||||| ||||||||||| Sbjct 1085 CCACCTCGCAGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAA 1026 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| |||||||| || | |||| ||||||||||| || || || Sbjct 1025 AGAGTTCTGCCA-TCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGG 967 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| || || | | || | | ||| | | || || Sbjct 966 GATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGAC 907 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || ||||| || ||||| ||||| Sbjct 906 CTCTAGGGTAATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCAT 859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493579537229520