Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq391541 127 1e-24 seq298504 96.9 2e-15 >seq391541 Length=1171 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||||| | ||||| || || ||||| || || ||||| |||||||| || Sbjct 1085 CCACCTCGCAGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAA 1026 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | || || | |||||| |||||| | |||| ||||||||| ||| || Sbjct 1025 AGAGTTCTGCCATCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGGG 966 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| || ||| || ||| | || || | || | ||| || Sbjct 965 ATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGACC 906 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 |||| ||||||||| ||||| || || ||||| || ||||||||||| || Sbjct 905 TCTAGGGTAATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCATCTT 856 >seq298504 Length=516 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || | ||| |||||||| |||||||| |||||||| || | Sbjct 275 CCACCACGGAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCA--G 218 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || | ||||| || || || || ||| | || | ||||| || || || Sbjct 217 ACAAGGTACGGCCATCTTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTG 158 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||||||||| ||||| ||| ||| | || || | ||| |||| Sbjct 157 GAATTCCTTCCTTGTCTTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTA 98 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||| || || ||||| || |||||||| || ||||| Sbjct 97 CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355508192463935