Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq298504 120 3e-22 seq391541 89.7 5e-13 >seq298504 Length=516 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| || |||||||||||||| |||||||| || ||||| |||||||| || || || Sbjct 276 TCCACCACGGAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGA 217 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | ||| ||| ||||| || ||||| ||| | || | ||| ||||| || || || Sbjct 216 CAAGGTACGGCCATCTTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGG 157 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 ||| ||||| || ||||| ||||| ||| | || | | |||||| | ||| || Sbjct 156 AATTCCTTCCTTGTCTTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTAC 97 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || | || ||||| || || || |||||||| || ||||| || Sbjct 96 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTTACAAATATCTGCATGGC 46 >seq391541 Length=1171 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 ||| || || || | ||| || | ||||| || || ||||||||||| || || || Sbjct 1086 TCCACCTCGCAGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGA 1027 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | ||| | ||| |||| ||||||||| ||| | |||| || || || || || || Sbjct 1026 AAGAGTTCTGCCATCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGG 967 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292 || || ||||| ||||| || || || | || | | ||| |||| ||||| Sbjct 966 GATTCCCTCTTTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGAC 907 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || |||| || || || || || ||||| || |||||||||||| Sbjct 906 CTCTAGGGTAATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCATC 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449559608550360