Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq429159 105 8e-18 seq432080 102 1e-16 >seq429159 Length=5605 Score = 105 bits (116), Expect = 8e-18 Identities = 152/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| ||||| || || |||||||| ||| || |||||||| || || ||||||| Sbjct 3708 CCTCATCACGTGAAATCAGTTCATTGCTGAAAGTCAAGCCTGGCATAAGCCCTCGCTTCT 3767 Query 127599 TCAACCAGAAAATCGCA-CAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 ||| ||||||||| ||| ||||| | ||||||||||| |||||||| ||| || || Sbjct 3768 TCAGCCAGAAAATGGCAGCAAAACTA-CCAGAGAAGAAAATCCCCTCGACAGCGGCAAAG 3826 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTG 127716 || | | |||||| | || || ||| | || || | |||||| | |||||| | Sbjct 3827 GCGATGATTCGCTCGCCGAAAGATGCAGAC-TCGTGACAGATCCACTTGAGCGCCCAATC 3885 Query 127717 TGCCTTTTTCTCGATACATGGGACGGTCT 127745 ||||| |||| || |||||| | |||| Sbjct 3886 GGCCTTCTTCTTGACACATGGCATCGTCT 3914 >seq432080 Length=12955 Score = 102 bits (112), Expect = 1e-16 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 117040 CCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 117099 |||||| ||||||| || | ||||||| | | ||| || |||||||||| ||||| | Sbjct 9812 CCTGCCGACTTTGAAATGAGGGCGCACTGCCTCAGAGTGTCGTAGATCCCTTCGATGCTG 9753 Query 117100 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTG 117159 || | | |||| | ||||||||||| || | ||||| | || || | ||| || Sbjct 9752 TCTTCGCTCATTGCCAGCAGGAAGCAGCTGGAGAGCTGTGGTCGCGGCGTTGCGGCGCTG 9693 Query 117160 AAGAGGGTTGGTGTCGCGTGGATGAACATA-CCTTGGGACATCTTATCGTAGGTCTCCAA 117218 || || || |||| |||||| |||| ||| | | || | | | ||| ||||| | Sbjct 9692 AACAGCGTGGGTGACGCGTGCGTGAA-ATATCGCTCCGATAGCAGGTTGTAAGTCTCAAT 9634 Query 117219 GACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 | ||| |||||| ||||| || ||||||| ||| || ||||| | ||||| Sbjct 9633 GGCAGCATCAATGTCCTCCCCATGGATACCGACTGACACACGCATCAGCATGT 9581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610190495719560