Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq418590 105 1e-17 seq429159 91.5 2e-13 seq432080 87.8 3e-12 >seq418590 Length=2458 Score = 105 bits (116), Expect = 1e-17 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 |||||| ||||| ||||||||||||| ||||| ||||||||||| | | || || Sbjct 884 GTTGGGTTCGGCGATGTGAATGTTCATCGACTGCGACTGGTCGATGAACGCTCCGCGGTC 825 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 || ||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 824 GGCAGCCATCTTGATCACAGTCTTCTGCGAAATCTCCCACACCGTCTT 777 >seq429159 Length=5605 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275 ||||||||||| |||||||||||| ||||||| ||||||| ||||| | |||| Sbjct 4065 GTACATTTCTGAGTGCACATTTTCCATGGCCACCTGAAAGCCATAGAAGCAGCGGGCCT- 4123 Query 160276 CAGATAC-TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGG 160334 | | || || |||||||| |||| || | | || || | || || | |||||||| Sbjct 4124 CTGTCACTTGGACCTCCTGGCTGAATCTCTCGACAAGGTTCTCGTTGACGATCCCGTCGG 4183 Query 160335 CGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCG 160378 ||| || ||||| || | ||||| || || || ||||||||| Sbjct 4184 AGGCAGCGAAGAAGGCAAGAACGTGTGATATAAAGTGTCTCTCG 4227 >seq432080 Length=12955 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 205160 ACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATT 205219 ||||||||||| |||||||| |||||| |||||||| || || |||||||| | | Sbjct 11197 ACCCTCTCCATGAACAGGTCTGGGATCCAGAGGCCGTAGAAAAGGTCACGGGCACGGACC 11138 Query 205220 CCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGG 205278 | || | || ||||| || | ||| || || || | ||||||||||||||||| Sbjct 11137 TCCTCCTTACCGGTATTCTTCTTGAGGTCGAG-GAACTCGAAGATGTCGGCGTGCCACGG 11079 Query 205279 CTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTG 205323 ||| | ||| || | ||||| |||| |||||| || ||||| Sbjct 11078 CTCGAGGTACATAGCAAACGCGCCCGGCCGCTTGTTGCCGCCCTG 11034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790856481654960