Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq382479 156 2e-32 seq430330 152 2e-31 seq421578 114 5e-20 seq391541 111 6e-19 seq356513 109 2e-18 seq340006 102 3e-16 seq419427 95.1 5e-14 >seq382479 Length=1021 Score = 156 bits (172), Expect = 2e-32 Identities = 402/605 (66%), Gaps = 13/605 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||||||||| |||||| | || ||||||| ||| ||||| || |||| ||| | ||||| Sbjct 996 AGCAATTGGGATTGATTTGGGCACCACCTATTCCTGTGTTGGAGTTTTTCAACAAGGAAA 937 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 || ||||| || || ||||||||||| ||||| ||||| | || || | Sbjct 936 GGTGGAAATCATCGCTAATGACCAAGGTAATCGAACGACTCCAAGTTTTGTTGCCTTCAG 877 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAA 451091 || | || | || | || | ||||| || | | | | | | || | | |||| Sbjct 876 TGACACCGAGCGTCTCATTGGCGATGCTGCCAAGAACCAAGTTGCCATGAA-TCCAAAAA 818 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 | || | | |||||| ||||| | ||||| || | ||||||| | | ||| Sbjct 817 ATACTATTTTTGATGCCAAACGCCTCATTGGTCGCCGATTTGATGATTCCAAGATTCAAG 758 Query 451152 AAGAGAAAAA--ATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 || | || ||| | ||| ||| | ||| ||||||||| | | Sbjct 757 CTGATATGAAGCATTGGCCATTCAC----TGTGATCAATAGTGGAGGAAAGCCAAAACTA 702 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||| | | | || || || || || ||| | || ||||| || ||||||||| Sbjct 701 CAAGCAGAATTCAAGGGAGAGTTGAAGACCTTTTCCCCAGAAGAGATCAGCTCTATGGTT 642 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | ||||||||||||||| || ||| || | | || | ||| | |||||||| Sbjct 641 TTGGTTAAAATGAAAGAAACGGCCGAAGCATTTCTGGGCACAAAAGTGAAGGATGCAGTC 582 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 ||||| || || || || ||||||||| | ||||||||||| || || |||||||| Sbjct 581 ATTACGGTACCAGCCTACTTCAATGATTCCCAACGGCAAGCTACGAAGGATGCAGGGGCA 522 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 || || || || || ||||| ||||| || || ||||| ||||| |||||||| |||||| Sbjct 521 ATCGCAGGGTTGAACGTTCTCCGAATCATCAACGAACCAACAGCTGCTGCTCTGGCATAT 462 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || || ||| || | ||| || |||| ||| || | | ||||| || || ||| Sbjct 461 GGTCT-GGACAAGAACCTGAA--AGGAGAACGCAATGTTCTTATCTTTGACTTGGGAGGA 405 Query 451508 GGAAC 451512 ||||| Sbjct 404 GGAAC 400 >seq430330 Length=6849 Score = 152 bits (168), Expect = 2e-31 Identities = 289/420 (69%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 451191 AAGGAAAGCCCTATATTCAAG-TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAA 451249 |||||||||| | || |||| | |||| ||||| || || | || | || ||| Sbjct 4560 AAGGAAAGCCTAAAATCCAAGCTGAATTC-AAAGGAGAGTTGAAGAGATTCTCGCCAGAA 4618 Query 451250 GAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCT 451309 ||||| || ||||||||| |||||||| || || || || ||| | || Sbjct 4619 GAAATCAGCTCGATGGTTCTTTTGAAAATGAAGGAGACTGCTGAGGCTTATCTAGGAGAC 4678 Query 451310 CCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 || ||||||||||| || ||||| || || ||||| || ||| | || || || || Sbjct 4679 AAGGTGACTGATGCAGTCATCACTGTACCTGCATATTTTAACGATTCTCAGCGACAGGCG 4738 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 |||||||| || || ||||||||| | || || |||||||| || |||||||| || Sbjct 4739 ACTAAAGACGCTGGTTCCATTGCTGGTCTGAACGTCCTTCGAATCATCAATGAACCAACT 4798 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 || ||||| | || ||||| | ||| || |||| | || ||||| |||| ||||| Sbjct 4799 GCTGCTGCATTGGCTTATGG-GTTGGACAA--GAAAGTCAAAGGAGAAAGAAATGTTTTA 4855 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---G 451546 | || ||| |||| ||||| || |||| ||| | || ||||||| || || Sbjct 4856 ATCTTCGATCTTGGCGGAGGCACCTTTGATGTTTCCATTCTCACAATTGATGAAGGATCC 4915 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 | || || ||||| || || ||| || |||||| |||| || || ||| | || ||| Sbjct 4916 TTGTTCGAGGTAAAAGCTACTGCTGGAGACACTCATTTAGGTGGAGAGGATTTCGACAAT 4975 >seq421578 Length=2869 Score = 114 bits (126), Expect = 5e-20 Identities = 204/297 (69%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| || || || || | ||||| || || |||||||| || |||| |||||||||| Sbjct 2196 AGTAACAGAAGCCGTCGTCACTGTACCAGCATATTTCAACGACCGACAAAGGCAAGCAAC 2255 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||||||| | || ||||| | | | || || || || || || || || || Sbjct 2256 ATTAGATGCAGGCAAGATCGCTGGACTTACAATCCTCCGTATCATCAACGAGCCAACGGC 2315 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 ||| ||||| |||||||| || | |||||||| | ||||| ||| | | | Sbjct 2316 AGCAGCTCTTGCATATGGTCTGG-------AAAAGAAA--GGAGAAAGCAATGTCCTGAT 2366 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG---GT 451548 |||||||| || || ||||| | ||| ||||| || || ||| || |||| | Sbjct 2367 TTTTGATTTGGGAGGTGGAACACTAGATGTCTCTGTCCTGTCCATTAAAAATGGCACCGA 2426 Query 451549 ATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||| | |||| |||||| ||||||||||| |||||||| |||| || Sbjct 2427 GTTTACAGTGTTGTCAACTTCTGGTGACACTCATCTAGGCGGTGAAGACTTTGACAA 2483 >seq391541 Length=1171 Score = 111 bits (122), Expect = 6e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| || || ||||| || ||||| || || || ||| | ||| Sbjct 859 ATGCAAATTTTCGTTAAAACCCTCACGGGTAAGACCATTACCCTAGAGGTCGAAGCTTCT 918 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || || || | |||| || || ||||| || || ||||| || || |||||| Sbjct 919 GACTCGATCGAGAATGTTAAGGCCAAGATCCAAGACAAAGAGGGAATCCCCCCCGATCAA 978 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || |||||||| || ||||| |||||| | | || || || Sbjct 979 CAGCGTCTGATCTTCGCTGGAAAACAACTGGAGGATGGCAGAACTCTTTCTGACTACAAC 1038 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || ||||| || || | ||| |||| Sbjct 1039 ATCCAAAAGGAGTCGACCCTGCACTTGGTTTTGCGTCTGCGAGG 1082 >seq356513 Length=768 Score = 109 bits (120), Expect = 2e-18 Identities = 202/294 (69%), Gaps = 12/294 (4%) Strand=Plus/Plus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||| || || || || | ||||| || || |||||||| || ||| | |||||||| Sbjct 191 AGTCACAGAAGCCGTCGTCACTGTACCGGCATATTTCAACGACCAACAGAGACAAGCAAC 250 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||||||||| | || ||||| | || | ||||| || || || || || || || Sbjct 251 ATTAGATGCAGGCAAGATCGCTGGACTTAAAATCCTTCGTATCATCAACGAGCCAACGGC 310 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 ||| ||||| |||||||| || | |||||||| ||| ||| ||| | | | Sbjct 311 AGCAGCTCTTGCATATGGTCTGG-------AAAAGAAAG-GAA-AAAGCAATGTCCTGAT 361 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA-- 451549 |||||||| || || || || | ||| |||||| || ||||| || |||| | Sbjct 362 TTTTGATTTGGGAGGTGGGACACTGGATGTTTCTGTTCTGGCAATTAAAAATGGTACAGA 421 Query 451550 -TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 ||| ||| | |||| |||||| ||||||||||| |||||||| |||| Sbjct 422 GTTTACAGTGTTGTCAACTTCTGGTGACACTCATCTAGGCGGTGAAGACTTTGA 475 >seq340006 Length=671 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||| |||| || || || || || ||||| || ||| | ||| Sbjct 277 ATGCAGATTTTCGTGAAGACATTGACAGGGAAGACAATCACCCTTGAGGTAGAAGCTTCT 218 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 ||| ||||| | ||| || || ||||| ||||||||||| || || ||||| Sbjct 217 GATTCGATTGAGAACGTGAAAGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 158 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || | || || || ||||| || ||| |||| ||| | || || || Sbjct 157 CAGCGATTGATCTTTGCCGGAAAGCAGCTTGAGGACGGACGAACATTGTCTGACTACAAC 98 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||| ||||| || Sbjct 97 ATCCAGAAGGAATCGACACTCCACTTGGT 69 >seq419427 Length=2563 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/224 (70%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 451230 CTAAAACTTTTGCT-CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACA 451288 |||||| || || ||||||||||| | || ||| | || | |||||||||| Sbjct 2277 CTAAAAGCATTCCTACCTGAAGAAATATGTTCAATGATACTGGGATATTTGAAAGAAACC 2218 Query 451289 GCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTC 451348 || ||| ||| ||||| ||| || || || || ||||||| || || ||||| Sbjct 2217 GCCGAAGCTTATCTTGGTGGGGAAGTCACGGAAGCCGTTGTTACTGTACCGGCATATTTT 2158 Query 451349 AATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTT 451408 || || ||| ||||||| | | |||||||| | || ||||| | ||| ||||| Sbjct 2157 AACGACCAACAGAGGCAAGCGATTTTGGATGCAGGCAAGATCGCTGGACTGAATATTCTT 2098 Query 451409 CGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || || || || || || || ||||| ||||| ||||| ||||| Sbjct 2097 CGTATAATCAACGAGCCAACGGCAGCAGCTCTTGCATACGGACT 2054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1964770369535028