Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq430330 343 1e-88 seq382479 311 7e-79 seq419427 116 3e-20 seq410947 93.3 3e-13 seq428957 91.5 1e-12 seq430300 87.8 1e-11 >seq430330 Length=6849 Score = 343 bits (380), Expect = 1e-88 Identities = 988/1491 (66%), Gaps = 38/1491 (3%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| || || || || |||||||||||||||||||| ||||| || || | || || Sbjct 5739 GCAGATACGTTCAGGATGCCATTGGCATCCAAATCAAACGTGACCTCGATCTTCGGTACA 5680 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||| | | ||||||||||| || ||| | ||| || || ||| || || || | Sbjct 5679 TCTCGCGGGGCAGGTGGGATGCCGGTCAAGTCAAAGGTGCCAAGAAGGTTGTTGTCCCTT 5620 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTAT-CTGAATA 517437 || | | || || || || | | || ||| || || || ||||| | || | | Sbjct 5619 GTCATTGCGCGCTCTCCTTCATACACTTTGATCGTGACACAAGACTGATTGTTCTCAGTG 5560 Query 517438 AGTTGTAAAT-ACTCTGGATTTT--TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 || || || ||| || ||| || || || || |||||| | || ||||| || Sbjct 5559 -GTGGTGAAGGACT---GAGTTTGCTTGCACGGGATGTGTGTGTTGCGCTCGATAATCTT 5504 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 | |||||| ||| | || || | ||| || ||||| || | |||||| || | | Sbjct 5503 TGACATAATTGAGCCTTCGGTCTCGATACCCAGGGAAAGTGGTGCGACATCTACCAAAAG 5444 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | || |||| | | | || | ||| | ||||||||||| | ||| || || Sbjct 5443 TACATCCTGAATTGCTGAACTGGTGTCTCCACTGATTATAGCTGCTTGTACAGCTGCTCC 5384 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 517674 ||||| || || || ||||| || | || ||| || || ||| |||||| || Sbjct 5383 GTATGCTACGGCCTCGTCAGGGTTGATTGTGAGATTCAGCGCCTTTCCACAGAAAAACTT 5324 Query 517675 TGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733 | || || ||| ||| || |||||||||| ||||||||| || || || | |||| Sbjct 5323 TTCGAGCAGGC-TCTGTACTTTTGGAATACGAGTTGATCCTCCCACCAAGACTACATCAT 5265 Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793 | | | | ||| |||| || | || | || | || | || ||| |||| | Sbjct 5264 GGATCGCTCCTTTGTCCATCTTGGCGTCGACCAATGCCTTCTTTACAGGTGCAAGTGT-G 5206 Query 517794 CTCTAAACAAG-TCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA-T 517850 | | || ||| || | ||| | || || || || | | | | | | | || | Sbjct 5205 TTGTTAAAAAGATCGGCACACAACTCCTCAAAACGCGCCCGGG--ACACTTTCGTGTAGT 5148 Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 | || | ||| ||||| | | ||||||||| || ||| || ||| ||| || |||| Sbjct 5147 AGTCCACTCCATCGAAAAGGGCATCAACTTCGATGCTAGCTTCAGTACTAGAGGAGAGTG 5088 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 517970 || || || || ||| ||| || | || | || | || || ||||| | | Sbjct 5087 TGCGCTTTGCTCGCTCAGCTGCAGTACGCAGCCGCCGCAGAGCAC--GCGGATTGGTGCG 5030 Query 517971 AATCTGTTT--TATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTAT 518027 ||| | ||| | ||||| ||||||| || ||| | | | | |||||||||||||| | Sbjct 5029 AATGTCTTTGCTGTATTTCTTCTTGAATTCGTCAGCCAGATGA-GTTACAAGACGATTGT 4971 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA-AAG--TC 518084 | ||||| || || || || | ||| | ||| | |||||| |||| | ||| ||| || Sbjct 4970 CGAAATCCTCTCCACCTAAATGAGTGTCTCCAGCAGTAGCTTTTACCTCGAACAAGGATC 4911 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| | | || | |||||| ||| || || || | ||| || || | | Sbjct 4910 CTTCATCAATTGTGAGAATGGAAACATCAAAGGTGCCTCCGCCAAGATCGAAGATTAAAA 4851 Query 518145 CATTCATTTCT---TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 |||| ||||| ||| ||| | || || | ||||| || || ||||||||||||| Sbjct 4850 CATTTCTTTCTCCTTTGACTT---TCTTGTCCAACCCATAAGCCAATGCAGCAGCAGTTG 4794 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 ||||||| || |||| | || || ||||||||||| || || |||||||| || | Sbjct 4793 GTTCATTGATGATTCGAAGGACGTTCAGACCAGCAATGGAACCAGCGTCTTTAGTCGCCT 4734 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 ||| || |||||||||||||||||||| ||||| || || |||||||| || | | | Sbjct 4733 GTCGCTGAGAATCGTTAAAATATGCAGGTACAGTGATGACTGCATCAGTCACCTTGTCTC 4674 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 | | |||||| || || | |||||||| | || ||| || |||| ||||| Sbjct 4673 CTAGATAAGCCTCAGCAGTCTCCTTCATTTTCAAAAGAACCATCGAGCTGATTTCTTCTG 4614 Query 518382 GGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 518440 | || || ||| | || ||||| || ||| | | || || |||| Sbjct 4613 GCGAGAATCTCTTCAACTCTCCTTTGA-ATTCAGCTTGGATTTTAGGCTTTCCTTCAACT 4555 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 | | ||| | |||||||||| ||||| || |||| | | |||| | |||||| Sbjct 4554 TCGACAACCGTGAATGGCCAGTGCTTCATGTCCTCCTGAATTTTGTAGTCA-TCAAATCT 4496 Query 518501 -CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 |||||||| | |||||||||||| |||| || || | ||||| ||||| | |||| Sbjct 4495 CCTACCAATGAGTCGTTTTGCATCGAAAACTGTGTTCTTGGGATTCATTGCCACCTGATT 4436 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||||| |||||||| || || ||| | || | |||| ||||| |||||||| Sbjct 4435 CTTGGCAGCATCTCCGATTAGCCTTTCGTTATCACTGAATGCGACATAGCTGGGAGTTGT 4376 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||||||||||| || || ||||| || || ||| | || | |||||| || || ||||| Sbjct 4375 TCGATTACCTTGGTCGTTGGCAATTATCTCCACTCTTCCTTGTTGCCACACTCCAACACA 4316 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACCAAT---AGCAATTTTATCTGACAT 518727 | || || || || || |||||||| || ||||||||| | ||| Sbjct 4315 GGAGTAGGTAGTACCCAAGTCGATACCAATCGCAGGAATTTTATCAGGCAT 4265 >seq382479 Length=1021 Score = 311 bits (344), Expect = 7e-79 Identities = 565/819 (69%), Gaps = 11/819 (1%) Strand=Plus/Plus Query 517901 GAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCT 517960 ||||| |||| ||| |||||||| ||| ||| ||||| ||||||| |||||| | Sbjct 181 GAAGAAAGTGTACGCTTAGCACGCTCAGCTGCAGTCCTCAGTCTTCTCAAGGCTCGAG-- 238 Query 517961 GATTGA--TTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAA 518018 ||||| || | || | | ||||||||||||||| || || | ||||||| | Sbjct 239 GATTGCCTTTGATGTCCTTGTGATATTTTCTCTTGAATTCATCGGCCAGGAATGTTACTA 298 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 |||| || || || || ||||| || | | ||| | ||| | || |||| |||| | Sbjct 299 GACGGTTGTCGAAGTCCTCACCACCAAGGTGAGTGTCTCCAGCAGTGGCTCGAACTTCAA 358 Query 518079 AAAG---TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAA 518135 | || ||| || || | | | || | ||||| |||||| || |||| |||| Sbjct 359 ACAGAGATCCTTCGTCGATGGTAAGAATGGACACATCGAAGGTTCCTCCTCCCAAGTCAA 418 Query 518136 AAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 518195 | ||||| ||||| |||| | |||| || || |||||||| || | |||||||| Sbjct 419 AGATAAGAACATTGCGTTCTCCTTTCAGGTTCTTGTCCAGACCATATGCCAGAGCAGCAG 478 Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 | |||||||| || || |||| | ||| || | || || ||| |||||||| || | Sbjct 479 CTGTTGGTTCGTTGATGATTCGGAGAACGTTCAACCCTGCGATTGCCCCTGCATCCTTCG 538 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 | ||||| | ||| ||||| || || || || || || ||||| || ||||| | |||| Sbjct 539 TAGCTTGCCGTTGGGAATCATTGAAGTAGGCTGGTACCGTAATGACTGCATCCTTCACTT 598 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 | | || | | | || ||||||| |||||||||| |||| ||| || || | Sbjct 599 TTGTGCCCAGAAATGCTTCGGCCGTTTCTTTCATTTTAACCAAAACCATAGAGCTGATCT 658 Query 518376 GTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTA 518434 |||||||||| | ||| | || |||| || | ||| | | ||| || Sbjct 659 CTTCTGGGGAAAAGGTCTTCAACTCTCCCTTGA-ATTCTGCTTGTAGTTTTGGCTTTCCT 717 Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCATT 518493 ||| ||| || || | |||||||| | |||||||| | ||||| ||| | |||| Sbjct 718 CCACTATTGATCACAGTGAATGGCCAATGCTTCATATCAGCTTGAA-TCTTGGAATCATC 776 Query 518494 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 ||| | |||||| | ||||| ||||||||||||||||| ||||||| || ||| | Sbjct 777 AAATCGGCGACCAATGAGGCGTTTGGCATCAAAAATAGTATTTTTTGGATTCATGGCAAC 836 Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 ||| | ||||| ||||| ||||| ||| | || || || | || | |||| | ||| Sbjct 837 TTGGTTCTTGGCAGCATCGCCAATGAGACGCTCGGTGTCACTGAAGGCAACAAAACTTGG 896 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 ||| || ||||||||||| ||||| || || ||||| || || || | ||| | || || Sbjct 897 AGTCGTTCGATTACCTTGGTCATTAGCGATGATTTCCACCTTTCCTTGTTGAAAAACTCC 956 Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 ||||| | | || || || |||||||| ||||| || Sbjct 957 AACACAGGAATAGGTGGTGCCCAAATCAATCCCAATTGC 995 >seq419427 Length=2563 Score = 116 bits (128), Expect = 3e-20 Identities = 256/381 (67%), Gaps = 17/381 (4%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 ||||| | || ||||| ||||| || || | | || | ||| | || || ||| Sbjct 1898 ACAAGCCTGTTGTCAAAGTCTTCTCCACCAAGGTGTGTGTCTCCAGCTGTGGCCAATACA 1957 Query 518075 TGGAAA--AGT-CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 |||| ||| |||| || || |||| | || ||||| | |||||||| |||| | Sbjct 1958 GTGAAATCAGTACCATATTTAATGGACAGGACAGAAACATCCAGTGTTCCACCTCCCAAA 2017 Query 518132 TCAAAAATAAGTACATT---CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 518188 || |||| || | ||| || | ||| |||||| || || || |||| | Sbjct 2018 TCGTAAATCAGGATATTGCGCAATCCTTC---------TTTATCCAGTCCGTATGCAAGA 2068 Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 || || || ||||| || || || || | | || ||| || ||||| || | |||||| Sbjct 2069 GCTGCTGCCGTTGGCTCGTTGATTATACGAAGAATATTCAGTCCAGCGATCTTGCCTGCA 2128 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || | | ||||| || ||| |||||||||||||| || ||||||| |||||| || Sbjct 2129 TCCAAAATCGCTTGCCTCTGTTGGTCGTTAAAATATGCCGGTACAGTAACAACGGCTTCC 2188 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368 || ||||| ||||| |||||| || |||| ||||| | | | |||||||| Sbjct 2189 GTGACTTCCCCACCAAGATAAGCTTCGGCGGTTTCTTTCAAATATCCCAGTATCATTGAA 2248 Query 518369 GAAATTTGTTCTGG--GGAAT 518387 | |||| ||| || ||||| Sbjct 2249 CATATTTCTTCAGGTAGGAAT 2269 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||||||||| ||||| || || ||||| ||||| || | || || Sbjct 2057 CCGTATGCAAGAGCTGCTGCCGTTGGCTCGTTGATTATACGAAGAATATTCAGTCCAGCG 2116 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || || | | ||| | | | ||||| |||||| ||| ||||||||||| ||||||||| Sbjct 2117 ATCTTGCCTGCATCCAAAATCGCTTGCCTCTGTTGGTCGTTAAAATATGCCGGTACAGTA 2176 Query 322364 ATAACTGCTT 322373 | ||| |||| Sbjct 2177 ACAACGGCTT 2186 >seq410947 Length=1832 Score = 93.3 bits (102), Expect = 3e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 ||||| ||||| ||||| || || | || ||||| || || || |||||| ||| ||| Sbjct 133 GCAGCCGCAGTAGGTTCGTTGATCACTCGTAAAACGTTGAGCCCGGCAATTTGTCCAGCA 192 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||||| || ||||||| ||| || ||||||||||| || || || || | |||||| Sbjct 193 TCTTTCGTAGCTTGTCGTTGAGAGTCGTTAAAATAGGCGGGCACTGTGACAACGGC 248 >seq428957 Length=5445 Score = 91.5 bits (100), Expect = 1e-12 Identities = 162/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || ||||| |||| ||| |||| ||| || ||| | || | ||| | || || ||| Sbjct 1444 GTGCCACCTCCCAGATCGAAAACAAGCACGTTCTTCTC---GCCTTCCCTCTTGTCCAGA 1500 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || || | |||||||||||||| || || || |||| || || || | |||| Sbjct 1501 CCGTAAGCGATCGCAGCAGCAGTTGGCTCGTTGATGATTCGCATCACGTTCAATCCAGAG 1560 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || | || ||||| || || ||||| | || | |||||||| || ||||| ||||| Sbjct 1561 ATGGTGCCCGCATCCTTGGTAGCTTGACGCTGCGCGTCGTTAAAGTACGCAGGCACAGTG 1620 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 | ||| || | || |||| || || | ||||| ||||| | ||||| || Sbjct 1621 ACAACTGCGTGGGTCACTTTCTTGCCGAGGTAAGCCTCAGCCGTCTCCTTCATCTT 1676 >seq430300 Length=6811 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 || ||||| || || || || || || | || ||| || || || ||||| ||||||| Sbjct 2706 GCGGCAGCCGTAGGCTCGTTGATGATGCGCAGAACGTTTAGGCCGGCAATGGCTCCTGCA 2765 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || |||||||||| |||||||||||| || || || || || || || || || || Sbjct 2766 TCCTTGGTGGCTTGTCGTTGTGAATCGTTGAAGTAAGCTGGCACCGTGATTACCGCGTCT 2825 Query 518309 GTTACTTC 518316 ||||||| Sbjct 2826 TTTACTTC 2833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3759360771954646