Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq382479 259 4e-63 seq430330 228 7e-54 seq419427 122 7e-22 seq410947 102 7e-16 seq356513 100 2e-15 seq421578 98.7 8e-15 seq209195 93.3 3e-13 seq356522 91.5 1e-12 >seq382479 Length=1021 Score = 259 bits (286), Expect = 4e-63 Identities = 420/597 (70%), Gaps = 12/597 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||||| || ||||| ||| |||||||| |||| ||| | || || Sbjct 996 AGCAATTGGGATTGATTTGGGCACCACCTATTCCTGTGTTGGAGTTTTTCAACAAGGAAA 937 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| || || ||||| |||||||| |||| |||||| || |||| | |||| Sbjct 936 GGTGGAAATCATCGCTAATGACCAAGGTAATCGAACGACTCCAAGTTTTGTTGCCTTCAG 877 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTAC 550167 || || || | | | |||| ||||| || || | |||| ||| || ||||| | Sbjct 876 TGACACCGAGCGTCTCATTGGCGATGCTGCCAAGAACCAAGTTGCCA-TG--AATCCAAA 820 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||||||||||||||||| ||||| | ||||| | | ||| ||||||| | |||| Sbjct 819 AAATACTATTTTTGATGCCAAACGCCTCATTGGTCGCCGATTTGATGATTCCAAGATTCA 760 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA 550287 || ||||||||||||||||| ||| | | ||| | ||||| || | | | Sbjct 759 AGCTGATATGAAGCATTGGCCATTCACTGTGATCAATAGTGGAGGAAAGCCAAAACTACA 700 Query 550288 AGCTACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 ||| | | |||| ||| || | ||||| |||||| | || |||||||||| Sbjct 699 AGC-AGAATTCAAGGGAGAGTTGAAGACCTTTTCCCCAGAAGAGATCAGCTCTATGGTTT 641 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | | ||||||||| |||| ||| || ||| | || | |||| | ||||||||| | Sbjct 640 TGGTTAAAATGAAAGAAACGGCCGAAGCATTTCTGGGCACAAAAGTGAAGGATGCAGTCA 581 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || |||||||| || || ||||| || ||||| |||||||| || ||||| || | Sbjct 580 TTACGGTACCAGCCTACTTCAATGATTCCCAACGGCAAGCTACGAAGGATGCAGGGGCAA 521 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | || || | || ||||| || || ||||| ||||| || |||||||| || ||||||| Sbjct 520 TCGCAGGGTTGAACGTTCTCCGAATCATCAACGAACCAACAGCTGCTGCTCTGGCATATG 461 Query 550527 GACTTGATA--AACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 | || || | ||| | | | ||||| ||||| || |||||||| | ||||| Sbjct 460 GTCTGGACAAGAACCTGA--AAGGAGAACGCAATGTTCTTATCTTTGACTTGGGAGG 406 >seq430330 Length=6849 Score = 228 bits (252), Expect = 7e-54 Identities = 379/541 (70%), Gaps = 10/541 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || || || || || || |||||||| || |||||| | || | | Sbjct 4283 GCGATTGGTATCGACTTGGGTACTACCTACTCCTGTGTTGGAGTGTGGCAACAAGGAAGA 4342 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || |||||||| || |||||||| |||| ||||| ||||| | |||| Sbjct 4343 GTGGAGATAATTGCCAACGACCAAGGTAATCGAACAACTCCCAGCTATGTCGCATTCAGT 4402 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCA 550169 || | ||| || | || ||||| || || |||| | || || ||||| | | Sbjct 4403 GATAACGAAAGGCTAATCGGAGATGCTGCCAAGAATCAGGTGGCAATG--AATCCCAAGA 4460 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | || |||| ||||| ||||| | ||||| || || ||| |||| | | |||||| Sbjct 4461 ACACAGTTTTCGATGCAAAACGACTCATTGGTAGGAGATTTGATGACTACAAAATTCAGG 4520 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 || |||||||| ||||| ||| |||| | ||| ||||| ||| | || ||| Sbjct 4521 AGGACATGAAGCACTGGCCATTCACGGTTGTCGAAGTTGAAGGAAAGCCTAAAATCCAAG 4580 Query 550290 CT--ACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 || | ||| ||||| ||| || | ||| || |||||| |||| || |||||| Sbjct 4581 CTGAATTCA--AAGGAGA-GTTGAAGAGATTCTCGCCAGAAGAAATCAGCTCGATGGTTC 4637 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | |||||||||| | || || |||| | | || | | || || |||||||| | Sbjct 4638 TTTTGAAAATGAAGGAGACTGCTGAGGCTTATCTAGGAGACAAGGTGACTGATGCAGTCA 4697 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | |||||||| ||||||||||| || || || || || || |||||||| ||||| | Sbjct 4698 TCACTGTACCTGCATATTTTAACGATTCTCAGCGACAGGCGACTAAAGACGCTGGTTCCA 4757 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| || || || ||||| || ||||||||||| |||||||||||| | || |||| Sbjct 4758 TTGCTGGTCTGAACGTCCTTCGAATCATCAATGAACCAACTGCTGCTGCATTGGCTTATG 4817 Query 550527 G 550527 | Sbjct 4818 G 4818 >seq419427 Length=2563 Score = 122 bits (134), Expect = 7e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 550356 TGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTAC 550415 ||||| |||| ||| |||| | ||||| ||||| ||||| || || | ||||||| Sbjct 2228 TGAAAGAAACCGCCGAAGCTTATCTTGGTGGGGAAGTCACGGAAGCCGTTGTTACTGTAC 2169 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 | ||||||||||| ||| ||| | ||||| | | ||||| || || ||||||| Sbjct 2168 CGGCATATTTTAACGACCAACAGAGGCAAGCGATTTTGGATGCAGGCAAGATCGCTGGAC 2109 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | ||| |||||||||| ||||| || || || || || || |||||||| ||||| |||| Sbjct 2108 TGAATATTCTTCGTATAATCAACGAGCCAACGGCAGCAGCTCTTGCATACGGACTGGATA 2049 Query 550536 AA 550537 || Sbjct 2048 AA 2047 >seq410947 Length=1832 Score = 102 bits (112), Expect = 7e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || |||||||| ||||| ||||| |||||||| ||||||||||||| ||| Sbjct 239 ACAGTGCCCGCCTATTTTAACGACTCTCAACGACAAGCTACGAAAGATGCTGGACAAATT 180 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || || || || ||| | || | ||||| ||||||||||| ||||| || || || || Sbjct 179 GCCGGGCTCAACGTTTTACGAGTGATCAACGAACCTACTGCGGCTGCCCTCGCTTACGG 121 >seq356513 Length=768 Score = 100 bits (110), Expect = 2e-15 Identities = 152/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 550373 GCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 || ||| |||| || ||| || || || || || | |||||||| |||||||| || || Sbjct 174 GCATTTCTTGG-CAGGAAAGTCACAGAAGCCGTCGTCACTGTACCGGCATATTTCAACGA 232 Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491 | ||| | ||||| || |||||| || || ||||||||||| | |||||||| Sbjct 233 CCAACAGAGACAAGCAACATTAGATGCAGGCAAGATCGCTGGACTTAAAATCCTTCGTAT 292 Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGA 550551 ||||| || || || || || || ||||||||||| || || ||| | || || ||| Sbjct 293 CATCAACGAGCCAACGGCAGCAGCTCTTGCATATGGTCTGGA-AAAGA-AAGGAAAAAG- 349 Query 550552 ACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || || ||||||| |||||| Sbjct 350 ---CAATGTCCTGATTTTTGATTTGGGAGGT 377 >seq421578 Length=2869 Score = 98.7 bits (108), Expect = 8e-15 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| || || || || | ||||||||||||||||| || ||| |||| | ||||| | Sbjct 2195 AAGTAACAGAAGCCGTCGTCACTGTACCAGCATATTTCAACGACCGACAAAGGCAAGCAA 2254 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | |||||| || || |||||||||| | || ||||| ||||| || || || | Sbjct 2255 CATTAGATGCAGGCAAGATCGCTGGACTTACAATCCTCCGTATCATCAACGAGCCAACGG 2314 Query 550509 CTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCT 550568 | || || ||||||||||| || || ||| | || | |||| ||||| || || | Sbjct 2315 CAGCAGCTCTTGCATATGGTCTGGA-AAAGA-AAGG----AGAAAGCAATGTCCTGATTT 2368 Query 550569 TTGATTGTGGAGGT 550582 |||||| |||||| Sbjct 2369 TTGATTTGGGAGGT 2382 >seq209195 Length=348 Score = 93.3 bits (102), Expect = 3e-13 Identities = 185/266 (70%), Gaps = 10/266 (4%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || || || ||||| || ||| || || || | || | || || Sbjct 277 GCAATTGGCATTGACTTGGGCACCACGTACTCTTGCGTGGGAGTCTTCCAGCAAGGGAAG 218 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCC-ATCTTATGTTTCTTTCAC 550110 || || ||||| ||||| |||||||||||| |||| ||||| | ||| ||| | |||| Sbjct 217 GTGGAGATTATCGCCAACGATCAAGGTAACCGAACGACTCCGAGCTT-CGTTGCATTCAG 159 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTA 550166 || || || | | | | |||| ||||| ||||| | || |||| || || || | Sbjct 158 CGACACCGAGAGACTCA-TTGGCGATGCCGCAAAGAACCAGGTGGCCA-TG--AACCCAA 103 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 || || || || ||||| |||||| | || || | |||| |||| ||| ||| Sbjct 102 AGAACACCATCTTCGATGCGAAACGTCTGATCGGCCGCCGTTTCGATGACCCGAAGATTC 43 Query 550227 AGGCAGATATGAAGCATTGGCCTTTC 550252 | ||||| |||||||||||||| ||| Sbjct 42 AAGCAGACATGAAGCATTGGCCCTTC 17 >seq356522 Length=768 Score = 91.5 bits (100), Expect = 1e-12 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 550373 GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGAC 550432 |||| | ||||| |||| || || || || | |||||||| |||||||| || ||| Sbjct 174 GCTTATCTTGGTGGGAAAGTCACAGAAGCCGTCGTCACTGTACCGGCATATTTCAACGAC 233 Query 550433 TCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATT 550492 ||| | ||||| || |||||| || || |||||||||| | || ||||| Sbjct 234 CAACAGAGACAAGCAACATTAGATGCAGGCAAGATCGCTGGACTTACAATCCTCCGTATC 293 Query 550493 ATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAA 550552 ||||| || || || || || || ||||||||||| || || ||| | || | |||| Sbjct 294 ATCAACGAGCCAACGGCAGCAGCTCTTGCATATGGTCTGGA-AAAGA-AAGG----AGAA 347 Query 550553 CTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||| || || ||||||| |||||| Sbjct 348 AGCAATGTCCTGATTTTTGATTTGGGAGGT 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4006423925385590