Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq358794 125 6e-24 >seq358794 Length=784 Score = 125 bits (138), Expect = 6e-24 Identities = 179/247 (72%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGC 29885 || || | ||| || || || || ||||| || || || || || || | |||| || || Sbjct 1 ACATGGGTGTCACCTAGTGTATGTACAAAGTCACCAGGCTTGTATCCTG-TGACATGGGC 59 Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945 ||||||||||| || || | |||||||| |||||||| || | || || |||||||| Sbjct 60 GATCATGTACGTAAGCAGTGCATAGCTGGCAATGTTAAACGGAATGCCAAGACCCATGTC 119 Query 29946 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACAT 30005 |||||| ||||| || || || ||||||| ||| || ||||| |||||| ||| Sbjct 120 TGCCGACCGTTGGTACAGTTGGCAGGAGAGCTTTCCATCAGCAACGTAGAACTGA-ACAA 178 Query 30006 GG-TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 30064 || |||||||| ||||||||||| | ||| ||| ||||| || |||| || Sbjct 179 GGCAATGGCACGGCGGAAGAGCCATCTTCGGGATGTCGACGGGATTCCATGCACACATGA 238 Query 30065 TGATGCG 30071 |||| || Sbjct 239 TGATTCG 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406463783142743