Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq298504 105 5e-18 seq391541 100 2e-16 seq340006 93.3 3e-14 >seq298504 Length=516 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| |||||| | ||| || || |||||||| || ||||| ||||| | | || Sbjct 266 AGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTACGG 207 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || || || || |||||||| ||||| | |||| || ||| Sbjct 206 CCATCTTCCAACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGAATTCCTTCC 147 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | || || || ||||| ||||| | || Sbjct 146 TTGTCTTGGATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACCTCAAGGGTG 87 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||||| || |||||||| |||||||| Sbjct 86 ATGGTCTTGCCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq391541 Length=1171 Score = 100 bits (110), Expect = 2e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| ||||| || ||||| ||||| ||| ||| Sbjct 1076 AGACGCAAAACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTTCTG 1017 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| || || || || || ||||| ||||||||||| | ||| | ||||| Sbjct 1016 CCATCCTCCAGTTGTTTTCCAGCGAAGATCAGACGCTGTTGATCGGGGGGGATTCCCTCT 957 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || || || || ||||| | ||| Sbjct 956 TTGTCTTGGATCTTGGCCTTAACATTCTCGATCGAGTCAGAAGCTTCGACCTCTAGGGTA 897 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 || || || ||||| | ||||| || ||||| |||||| ||| Sbjct 896 ATGGTCTTACCCGTGAGGGTTTTAACGAAAATTTGCATCTTGT 854 >seq340006 Length=671 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 ||||| | ||||| || || || || || || || ||||| ||||| | |||| Sbjct 60 AGCCGAAGGACCAAGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGT 119 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| |||||| ||||| | ||| | || ||| Sbjct 120 CCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCC 179 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| || | | || || || || || ||||| | || Sbjct 180 TTGTCTTGGATCTTGGCTTTCACGTTCTCAATCGAATCAGAAGCTTCTACCTCAAGGGTG 239 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || || || || ||||| || || || ||||||||||| || Sbjct 240 ATTGTCTTCCCTGTCAATGTCTTCACGAAAATCTGCATGGT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378929683981593