Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq432080 100 5e-16 seq429159 84.2 4e-11 >seq432080 Length=12955 Score = 100 bits (110), Expect = 5e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 222031 GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTG 222090 |||||||| |||||| ||||| |||||||| || | | || || || | || || Sbjct 11198 GACCCTCTCCATGAACAGGTCTGGGATCCAGAGGCCGTAGAAAAGGTCACGGGCACGGAC 11139 Query 222091 CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGG 222150 ||||||| ||| | || ||| | || || | ||||| || ||||| ||||||||||| Sbjct 11138 CTCCTCCTTACCGGTATTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGG 11079 Query 222151 CTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 ||| || || | || | ||||| || ||||||||||| ||||| Sbjct 11078 CTCGAGGTACATAGCAAACGCGCCCGGCCGCTTGTTGCCGCCCTG 11034 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 ||||||| ||| | |||||||||||| | |||||||| ||| |||||| | Sbjct 12547 GCAGCGTAGTACAGTGTCTCAAAGATCTGCGTGTTGAGTTTCTGGGCCTCCTCGCTCTCG 12488 Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 || ||||| |||| | ||| ||||||| || ||||| | || || || |||||| Sbjct 12487 AACGGCATGCGCATGAGGATGAAGGCGTCGGCAAGGCCCTGGATGCCAATTCCAATGGGC 12428 Query 221543 CTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGA 221602 | ||||| |||||||| | || || ||||| || || ||||||| ||||| | Sbjct 12427 CGGTGTCGGGTGTTGGAAACCTTGGCCTCGGGCACTGGGTAGTAGTTGACATCGATGATC 12368 Query 221603 TTGTTGAGGTT 221613 ||||| | ||| Sbjct 12367 TTGTTCAAGTT 12357 >seq429159 Length=5605 Score = 84.2 bits (92), Expect = 4e-11 Identities = 107/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| | || ||||| || ||||| || || || || |||||||| || |||||||| Sbjct 4207 ACGTTCTTGCCTTCTTCGCTGCCTCCGACGGGATCGTCAACGAGAACCTTGTCGAGAGAT 4148 Query 25655 TCACCAGGGAAGTGCA-GT-ACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | ||| || || || || |||||| || ||||| || || ||| ||||||| Sbjct 4147 TCAGCCAGGAGGTCCAAGTGACA--GAGGCCCGCTGCTTCTATGGCTTTCAGGTGGCCAT 4090 Query 25713 CGAAAATGTGCACTCTGAGGTGTA 25736 |||||||||||||| || |||| Sbjct 4089 GGAAAATGTGCACTCAGAAATGTA 4066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923823337295040