Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq382479 280 1e-69 seq430330 223 2e-52 seq421578 98.7 6e-15 seq419427 91.5 1e-12 >seq382479 Length=1021 Score = 280 bits (310), Expect = 1e-69 Identities = 423/594 (71%), Gaps = 8/594 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| |||||||| || || || || ||||| | |||| ||| | || || Sbjct 995 GCAATTGGGATTGATTTGGGCACCACCTATTCCTGTGTTGGAGTTTTTCAACAAGGAAAG 936 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || || ||||||||||||||| |||| || ||| | |||| | || | | Sbjct 935 GTGGAAATCATCGCTAATGACCAAGGTAATCGAACGACTCCAAGTTTTGTTGCCTTCAGT 876 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | ||| ||||| |||||||| || | |||| ||| ||||| ||| Sbjct 875 GACACCGAGCGTCTCATTGGCGATGCTGCCAAGAACCAAGTTGCCATGAATCCAAAAAAT 816 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 |||||||||||||| ||| | | |||||||| ||||||||| ||| | ||| || Sbjct 815 ACTATTTTTGATGCCAAACGCCTCATTGGTCGCCGATTTGATGATTCCAAGATTCAAGCT 756 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 |||||| |||||||| || | ||||| ||| ||| || || ||| | || |||| Sbjct 755 GATATGAAGCATTGGCCATTCACTGTGATCAATAGTGGAGGAAAGCCAAAACTACAAGCA 696 Query 474628 -AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 ||| || | || || || ||||| || ||| | || || |||||||| | Sbjct 695 GAATTCAAG--GGAGAGTTGAAGACCTTTTCCCCAGAAGAGATCAGCTCTATGGTTTTGG 638 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAATT 474745 ||||||||| |||| || ||| ||| || |||| |||| | |||||||| ||| Sbjct 637 TTAAAATGAAAGAAACGGCCGAAGCATTTCTGGGCACAA-AAGTGAAGGATGCAGTCATT 579 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| ||||| ||||| || || ||||| || ||| Sbjct 578 ACGGTACCAGCCTACTTCAATGATTCCCAACGGCAAGCTACGAAGGATGCAGGGGCAATC 519 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||| | || ||| | || || || || ||||||||||| || || || || |||||| Sbjct 518 GCAGGGTTGAACGTTCTCCGAATCATCAACGAACCAACAGCTGCTGCTCTGGCATATGGT 459 Query 474866 CTTGATAAGAATTCTGACA-AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 || || ||||| |||| | |||| |||||| | |||||||| | ||||| Sbjct 458 CTGGACAAGAA-CCTGAAAGGAGAACGCAATGTTCTTATCTTTGACTTGGGAGG 406 >seq430330 Length=6849 Score = 223 bits (246), Expect = 2e-52 Identities = 411/597 (69%), Gaps = 12/597 (2%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| |||||||| || || || ||||| ||| ||||| | || |||||| | || | Sbjct 4282 TGCGATTGGTATCGACTTGGGTACTACCTACTCCTGTGTTGGAGTGTGGCAACAAGGAAG 4341 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || ||||||||||| |||||||||||| ||||||| || ||||| | || | Sbjct 4342 AGTGGAGATAATTGCCAACGACCAAGGTAATCGAACAACTCCCAGCTATGTCGCATTCAG 4401 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| | ||| || || ||||||||||| || |||| | ||| ||||| || Sbjct 4402 TGATAACGAAAGGCTAATCGGAGATGCTGCCAAGAATCAGGTGGCAATGAATCCCAAGAA 4461 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||| ||||| ||| || | |||||| | | |||||||| || | || Sbjct 4462 CACAGTTTTCGATGCAAAACGACTCATTGGTAGGAGATTTGATGACTACAAAATTCAGGA 4521 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 || ||| || ||||| || | ||| | | |||| || || || | || |||| Sbjct 4522 GGACATGAAGCACTGGCCATTCACGGTTGTCGAAGTTGAAGGAAAGCCTAAAATCCAAGC 4581 Query 474628 --AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 ||| || ||| || || ||| || || ||| |||| || |||||| | Sbjct 4582 TGAATTCAA--AGGAGAGTTGAAGAGATTCTCGCCAGAAGAAATCAGCTCGATGGTTCTT 4639 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||||||| | || || ||| | ||||| ||| | | || ||||||||||| || Sbjct 4640 TTGAAAATGAAGGAGACTGCTGAGG-CTTATCTAGGAGACAAGGTGACTGATGCAGTCAT 4698 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||||| || ||||||||||| |||||||| || || || |||||||| || || || Sbjct 4699 CACTGTACCTGCATATTTTAACGATTCTCAGCGACAGGCGACTAAAGACGCTGGTTCCAT 4758 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||||| || || | || || || ||||||||||| || || ||| | |||||||| Sbjct 4759 TGCTGGTCTGAACGTCCTTCGAATCATCAATGAACCAACTGCTGCTGCATTGGCTTATGG 4818 Query 474865 TCTTGATAAGAATTCTGACAA---AGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 | || ||||| | ||| |||| ||||||||||||||| ||| ||| || Sbjct 4819 GTTGGACAAGAA---AGTCAAAGGAGAAAGAAATGTTTTAATCTTCGATCTTGGCGG 4872 >seq421578 Length=2869 Score = 98.7 bits (108), Expect = 6e-15 Identities = 150/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 474711 CATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGAT 474769 |||||||||| || ||| ||||| || || || | ||||| ||||||||||| || || Sbjct 2180 CATATCTTGG-CAGGAAAGTAACAGAAGCCGTCGTCACTGTACCAGCATATTTCAACGAC 2238 Query 474770 TCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATT 474829 ||| | |||||||| |||||| || | || || || |||| | | ||||| Sbjct 2239 CGACAAAGGCAAGCAACATTAGATGCAGGCAAGATCGCTGGACTTACAATCCTCCGTATC 2298 Query 474830 ATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAA 474889 || || || ||||| ||||| || ||||| |||||||| || ||||| || |||| Sbjct 2299 ATCAACGAGCCAACGGCAGCAGCTCTTGCATATGGTCTGGAAAAGAA--AGGAGAAAG-- 2354 Query 474890 GTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 ||||| | || ||||||| |||||| Sbjct 2355 --CAATGTCCTGATTTTTGATTTGGGAGGT 2382 >seq419427 Length=2563 Score = 91.5 bits (100), Expect = 1e-12 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 474658 ACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCG--AGCTCATAT 474715 ||| ||| |||| | ||||||| | | | | ||||| ||||||| |||| ||| Sbjct 2263 ACCTGAAGAAATATGTTCAATGATACTGGGATATTTGAAAGAAACCGCCGAAGCT--TAT 2206 Query 474716 CTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAA 474775 ||||| ||||| || || || || ||||||| || ||||||||||| || || Sbjct 2205 CTTGGTGGGGAAGTCACGGAAGCCGTTGTTACTGTACCGGCATATTTTAACGACCAACAG 2146 Query 474776 CGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAAT 474835 | ||||| | | ||||| || | || || || || ||| || | ||||| || || Sbjct 2145 AGGCAAGCGATTTTGGATGCAGGCAAGATCGCTGGACTGAATATTCTTCGTATAATCAAC 2086 Query 474836 GAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 || ||||| ||||| || ||||| || || || ||||| Sbjct 2085 GAGCCAACGGCAGCAGCTCTTGCATACGGACTGGATAA 2048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3249627562563668