Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq298504 102 1e-16 seq340006 86.0 1e-11 >seq298504 Length=516 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||||| |||| ||||| || || ||||| || || || | ||| || Sbjct 257 ACAAGATGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTACGGCCATCTTCC 198 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 || || ||||| || || || | || ||| ||||| || || |||||||| || ||||| Sbjct 197 AACTGCTTTCCCGCGAAGATGAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGG 138 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||| | ||| | ||| ||| | ||||| | ||| || || || || || || || Sbjct 137 ATTTTCGCTTTCACATTCTCAATTGAGTCGGATGCCTCTACCTCAAGGGTGATGGTCTTG 78 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||||||||| ||||| Sbjct 77 CCCGTCAGGGTCTTTACAAATATCTGCAT 49 >seq340006 Length=671 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| || | ||| | || || || || ||||| || || |||| Sbjct 63 CGAAGGACCAAGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGTCCG 122 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || ||||||||||| || |||| ||| ||||| || || |||||||| || Sbjct 123 TCCTCAAGCTGCTTTCCGGCAAAGATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTG 182 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | || ||| | ||| |||| || || || || || || Sbjct 183 TCTTGGATCTTGGCTTTCACGTTCTCAATCGAATCAGAAGCTTCTACCTCAAGGGTGATT 242 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || || || || ||||| Sbjct 243 GTCTTCCCTGTCAATGTCTTCACGAAAATCTGCAT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894790744611120