Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq269497 132 8e-25 seq432080 109 9e-18 seq430156 105 1e-16 seq418590 95.1 2e-13 seq306108 87.8 3e-11 >seq269497 Length=445 Score = 132 bits (146), Expect = 8e-25 Identities = 173/240 (72%), Gaps = 12/240 (5%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| ||| || || ||| ||| Sbjct 426 TGTACTTGGTGACCGCCTTGGTCCCCTCGCTGACGGCGTGCTCGGCGAGCTCACCGGGCA 367 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||| ||||||||||||||||| | || ||| |||||| | | Sbjct 366 ---------GCACTGCGGTCTGGATCTCGCGAATCGTGAGCGTCGACCGCTTGAT---GT 319 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| |||| | |||| | |||||| |||| ||||||||||| || ||||| Sbjct 318 GCGCCAGACGGCTAGGTTCGGCGGCGATGCTCTCGAAAATGTCGTTGACGAAGCTGTTCA 259 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || |||||| | ||| ||||| |||||||| |||||||||| Sbjct 258 TGATGCTCATCGCCTTCGAAGAGATGACTGTGTCAGGGTGGACCTGCTTTAGCACCTTGT 199 >seq432080 Length=12955 Score = 109 bits (120), Expect = 9e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||||||| |||| |||||||| || || || || || ||| ||||||||| Sbjct 11189 CATGAACAGGTCTGGGATCCAGAGGCCGTAGAAAAGGTCACGGGCACGGACCTCCTCCTT 11130 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 ||| ||||| || |||||||| | |||| || |||||||||||||||||| ||||| Sbjct 11129 ACCGGTATTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTA 11070 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||| |||||| |||||| |||||| Sbjct 11069 CATAGCAAACGCGCCCGGCCGCTTGTTGCCGCC 11037 >seq430156 Length=6607 Score = 105 bits (116), Expect = 1e-16 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 ||||| ||| || || || |||||||| || || |||||||| || || |||||| Sbjct 3025 GTCGATCAAGGAACACTGTTCGAGTTGATTCTTGCTGCCAACTATCTGGATATCAAGGGT 2966 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 || || ||| || ||||||||||| || ||| | ||||| |||||| | || || || Sbjct 2965 CTTCTGGATGTGACATGCAAGACCGTTGCTAACATGATCAAAGGCAAGACCCCTGAAGAG 2906 Query 2035734 ATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||| || || |||||| ||| Sbjct 2905 ATCCGCAAGACTTTCAATATCAAGAACG 2878 >seq418590 Length=2458 Score = 95.1 bits (104), Expect = 2e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 2069617 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATGACCTCGCACGCCTC 2069675 || || || || | |||||| || |||||||||||| |||| ||| | ||| | | ||| Sbjct 368 AATTCACCGGACAACACGCGTCGGGTGTAGATGTTGGACGTGTATGGC-TCGAAAGACTC 310 Query 2069676 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTT 2069735 | |||| || |||||||||| ||||| ||||| ||||| |||| | ||||||||||| Sbjct 309 GTTGTTTCCGAGGATCTGCGCCGTCGACGCCGTTGGCATCGGCGCTAGCAGCAGCGAGTT 250 Query 2069736 GCGCAGGCCGT 2069746 ||| ||||| Sbjct 249 TCGCGCGCCGT 239 >seq306108 Length=538 Score = 87.8 bits (96), Expect = 3e-11 Identities = 118/158 (75%), Gaps = 10/158 (6%) Strand=Plus/Minus Query 429666 TACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAG---TCGGAGATG 429722 |||||||||||||| |||||||||||||||||| |||||||||| ||| ||||| Sbjct 536 TACAACGCCGACTTCGACGGCGACGAGATGAACTTGCACGTGCCGCAGAGCATGGAGA-- 479 Query 429723 GCACGCGCCGAAGTCGCCCACA-CCATG-GGCGTGGCCCTCAAGGCCGTGTCGCCGCAGG 429780 |||||||||| || | ||| ||| | | || | | || || | | ||||||| | Sbjct 478 -CACGCGCCGAGGTGGAGAACATCCACGTGACGCCG-CGTC-AGATCATCACGCCGCAAG 422 Query 429781 CCAACAAGCCCATCATCGGGCTCGTGATGGACGCCCTC 429818 |||||||||| |||| ||| | ||| |||| | ||| Sbjct 421 CCAACAAGCCGGTCATGGGGATTGTGCAGGACACGCTC 384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7870240359738549