Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq298504 113 1e-19 seq407459 84.2 5e-11 >seq298504 Length=516 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || || || ||||| | || || || || ||| Sbjct 52 CAGATATTTGTAAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTAGAGGCATCCGAC 111 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||||| ||| || ||||| || ||||||||| || || || Sbjct 112 TCAATTGAGAATGTGAAAGCGAAA-ATCCAAGACAAGGAAGGAATTCCACCAGATCAGCA 170 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| |||||||| |||||||||||||||||||| | || ||| | || |||||| | Sbjct 171 GCGACTCATCTTCGCGGGAAAGCAGTTGGAAGATGGCCGTACCTTGTCTGACTACAACAT 230 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| ||||| ||||| || || ||||| ||||| || || Sbjct 231 CCAAAAAGAATCTACCCTGCATCTTGTGTTGAGGCTCCG 269 >seq407459 Length=1649 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | | || | ||||||||| ||||| || || | |||||||||| | ||| Sbjct 107 TCGAAGACGGAGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTATAGTCAGAAAGAGT 48 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||||||| || || ||||||||||| ||||| ||| Sbjct 47 TCGGCCATCTTCCAGCTGTTTGCCTGCGAAGATAAGACGTTGCTGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175271987111211