Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphinemura_20sulcicollis_20[genbank_20GCA_5F001676325.1_202016-06- 24] 432,491 sequences; 271,924,966 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq278002 89.7 2e-14 seq116928 89.7 2e-14 seq430138 87.8 6e-14 seq418989 87.8 6e-14 seq395230 87.8 6e-14 seq57794 87.8 6e-14 seq422251 86.0 2e-13 seq412404 86.0 2e-13 seq410220 84.2 7e-13 seq166462 84.2 7e-13 seq362700 82.4 2e-12 seq427131 80.6 8e-12 >seq278002 Length=464 Score = 89.7 bits (98), Expect = 2e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 62 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 6 >seq116928 Length=260 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 150 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCTTGGTTCGATC 209 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 210 CCTGGTTTCGGC 221 >seq430138 Length=6579 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct 6521 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCTGG 6578 >seq418989 Length=2507 Score = 87.8 bits (96), Expect = 6e-14 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 60 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 5 >seq395230 Length=1251 Score = 87.8 bits (96), Expect = 6e-14 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 59 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 4 >seq57794 Length=226 Score = 87.8 bits (96), Expect = 6e-14 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 167 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 222 >seq422251 Length=2989 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||| | | Sbjct 1356 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCGATC 1415 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 1416 CCTGGTTTCGGC 1427 Score = 82.4 bits (90), Expect = 2e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2781 CAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 ||||||||||||| |||||||||||||||||||||||||||||| | ||| || ||| || Sbjct 1 CAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCTGGTTTCGGC 60 >seq412404 Length=1916 Score = 86.0 bits (94), Expect = 2e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 55 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 1 >seq410220 Length=1788 Score = 84.2 bits (92), Expect = 7e-13 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 54 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 1 >seq166462 Length=301 Score = 84.2 bits (92), Expect = 7e-13 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 248 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 301 >seq362700 Length=814 Score = 82.4 bits (90), Expect = 2e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 2781 CAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 ||||||||||||| |||||||||||||||||||||||||||||| | ||| || ||| || Sbjct 814 CAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCTGGTTTCGGC 755 >seq427131 Length=4393 Score = 80.6 bits (88), Expect = 8e-12 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2782 AGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||||||| |||||||||||||||||||||||||||||| | ||| || ||| || Sbjct 1 AGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCTGGTTTCGGC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15774625522695